Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AP001271.2-201ENST00000624018 1556 ntBASIC20.74■□□□□ 0.91
SYN1P17600 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.74■□□□□ 0.91
SYN1P17600 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYN1P17600 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SYN1P17600 AC243591.1-201ENST00000452967 1364 ntBASIC20.73■□□□□ 0.91
SYN1P17600 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 IGHV3-47-201ENST00000425060 335 ntBASIC20.73■□□□□ 0.91
SYN1P17600 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 MIR3917-201ENST00000580971 93 ntBASIC20.73■□□□□ 0.91
SYN1P17600 AC005332.3-201ENST00000589904 676 ntBASIC20.73■□□□□ 0.91
SYN1P17600 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.73■□□□□ 0.91
SYN1P17600 AC055717.3-201ENST00000622967 595 ntBASIC20.73■□□□□ 0.91
SYN1P17600 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SYN1P17600 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.73■□□□□ 0.91
SYN1P17600 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SYN1P17600 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYN1P17600 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYN1P17600 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYN1P17600 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYN1P17600 AL023284.2-201ENST00000405850 579 ntBASIC20.72■□□□□ 0.91
SYN1P17600 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.72■□□□□ 0.91
SYN1P17600 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYN1P17600 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYN1P17600 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.72■□□□□ 0.91
SYN1P17600 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SYN1P17600 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.72■□□□□ 0.91
SYN1P17600 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SYN1P17600 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SYN1P17600 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.71■□□□□ 0.91
SYN1P17600 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SYN1P17600 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SYN1P17600 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.71■□□□□ 0.91
SYN1P17600 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.71■□□□□ 0.91
SYN1P17600 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SYN1P17600 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.71■□□□□ 0.91
SYN1P17600 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 LINC00565-201ENST00000562710 2331 ntBASIC20.71■□□□□ 0.91
SYN1P17600 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYN1P17600 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.71■□□□□ 0.91
SYN1P17600 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SYN1P17600 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SYN1P17600 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.7■□□□□ 0.9
SYN1P17600 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SYN1P17600 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SYN1P17600 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SYN1P17600 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.7■□□□□ 0.9
SYN1P17600 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.7■□□□□ 0.9
SYN1P17600 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 AC009065.1-201ENST00000564055 1225 ntBASIC20.7■□□□□ 0.9
SYN1P17600 AC027796.2-201ENST00000575326 344 ntBASIC20.7■□□□□ 0.9
SYN1P17600 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.7■□□□□ 0.9
SYN1P17600 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.7■□□□□ 0.9
SYN1P17600 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 AC112497.1-201ENST00000624824 639 ntBASIC20.7■□□□□ 0.9
SYN1P17600 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.7■□□□□ 0.9
SYN1P17600 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.7■□□□□ 0.9
SYN1P17600 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYN1P17600 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SYN1P17600 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms