Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.28■■□□□ 1.48
SNRPA1P09661 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SNRPA1P09661 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SNRPA1P09661 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SNRPA1P09661 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.27■■□□□ 1.48
SNRPA1P09661 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
SNRPA1P09661 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.27■■□□□ 1.48
SNRPA1P09661 SPDYE13P-201ENST00000445314 798 ntBASIC24.27■■□□□ 1.48
SNRPA1P09661 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.27■■□□□ 1.48
SNRPA1P09661 RASA4DP-201ENST00000460726 1199 ntBASIC24.27■■□□□ 1.48
SNRPA1P09661 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.27■■□□□ 1.48
SNRPA1P09661 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SNRPA1P09661 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC24.27■■□□□ 1.48
SNRPA1P09661 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.27■■□□□ 1.48
SNRPA1P09661 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNRPA1P09661 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC24.27■■□□□ 1.48
SNRPA1P09661 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.27■■□□□ 1.48
SNRPA1P09661 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.26■■□□□ 1.47
SNRPA1P09661 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.26■■□□□ 1.47
SNRPA1P09661 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.26■■□□□ 1.47
SNRPA1P09661 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.26■■□□□ 1.47
SNRPA1P09661 KRT18P56-201ENST00000507275 550 ntBASIC24.26■■□□□ 1.47
SNRPA1P09661 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.26■■□□□ 1.47
SNRPA1P09661 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.26■■□□□ 1.47
SNRPA1P09661 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
SNRPA1P09661 AC024243.1-201ENST00000609234 778 ntBASIC24.26■■□□□ 1.47
SNRPA1P09661 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.26■■□□□ 1.47
SNRPA1P09661 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRPA1P09661 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SNRPA1P09661 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
SNRPA1P09661 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
SNRPA1P09661 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.25■■□□□ 1.47
SNRPA1P09661 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 HBZP1-201ENST00000354915 429 ntBASIC24.25■■□□□ 1.47
SNRPA1P09661 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.25■■□□□ 1.47
SNRPA1P09661 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SNRPA1P09661 AC034232.1-201ENST00000506026 1064 ntBASIC24.25■■□□□ 1.47
SNRPA1P09661 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.25■■□□□ 1.47
SNRPA1P09661 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.25■■□□□ 1.47
SNRPA1P09661 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
SNRPA1P09661 AC093458.2-201ENST00000623150 629 ntBASIC24.25■■□□□ 1.47
SNRPA1P09661 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.25■■□□□ 1.47
SNRPA1P09661 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.25■■□□□ 1.47
SNRPA1P09661 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SNRPA1P09661 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.25■■□□□ 1.47
SNRPA1P09661 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNRPA1P09661 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
SNRPA1P09661 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.24■■□□□ 1.47
SNRPA1P09661 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRPA1P09661 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.24■■□□□ 1.47
SNRPA1P09661 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNRPA1P09661 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
SNRPA1P09661 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.24■■□□□ 1.47
SNRPA1P09661 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNRPA1P09661 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.24■■□□□ 1.47
SNRPA1P09661 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SNRPA1P09661 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.24■■□□□ 1.47
SNRPA1P09661 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SNRPA1P09661 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.24■■□□□ 1.47
SNRPA1P09661 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRPA1P09661 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRPA1P09661 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
SNRPA1P09661 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
SNRPA1P09661 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNRPA1P09661 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.24■■□□□ 1.47
SNRPA1P09661 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRPA1P09661 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms