Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC6P09630 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.53■■□□□ 1.04
HOXC6P09630 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HOXC6P09630 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HOXC6P09630 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.52■■□□□ 1.04
HOXC6P09630 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC6P09630 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HOXC6P09630 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.52■■□□□ 1.03
HOXC6P09630 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HOXC6P09630 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.52■■□□□ 1.03
HOXC6P09630 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
HOXC6P09630 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.51■■□□□ 1.03
HOXC6P09630 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HOXC6P09630 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
HOXC6P09630 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
HOXC6P09630 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.51■■□□□ 1.03
HOXC6P09630 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
HOXC6P09630 HLA-F-220ENST00000434407 884 ntBASIC21.51■■□□□ 1.03
HOXC6P09630 NUS1P1-201ENST00000446295 882 ntBASIC21.51■■□□□ 1.03
HOXC6P09630 FAAHP1-202ENST00000446499 1238 ntBASIC21.51■■□□□ 1.03
HOXC6P09630 KRT17P6-201ENST00000453795 1220 ntBASIC21.51■■□□□ 1.03
HOXC6P09630 SEC1P-202ENST00000473944 940 ntBASIC21.51■■□□□ 1.03
HOXC6P09630 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.51■■□□□ 1.03
HOXC6P09630 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.51■■□□□ 1.03
HOXC6P09630 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.51■■□□□ 1.03
HOXC6P09630 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.51■■□□□ 1.03
HOXC6P09630 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.51■■□□□ 1.03
HOXC6P09630 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
HOXC6P09630 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
HOXC6P09630 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
HOXC6P09630 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC6P09630 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.5■■□□□ 1.03
HOXC6P09630 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.5■■□□□ 1.03
HOXC6P09630 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC6P09630 AL162741.1-201ENST00000565563 1558 ntBASIC21.5■■□□□ 1.03
HOXC6P09630 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
HOXC6P09630 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.5■■□□□ 1.03
HOXC6P09630 KRT8P26-201ENST00000534154 1276 ntBASIC21.5■■□□□ 1.03
HOXC6P09630 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.5■■□□□ 1.03
HOXC6P09630 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.5■■□□□ 1.03
HOXC6P09630 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.5■■□□□ 1.03
HOXC6P09630 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.5■■□□□ 1.03
HOXC6P09630 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC6P09630 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
HOXC6P09630 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC6P09630 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC6P09630 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC6P09630 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC6P09630 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.49■■□□□ 1.03
HOXC6P09630 AC036111.1-201ENST00000533973 1582 ntBASIC21.49■■□□□ 1.03
HOXC6P09630 AC093525.10-201ENST00000625130 1569 ntBASIC21.49■■□□□ 1.03
HOXC6P09630 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.49■■□□□ 1.03
HOXC6P09630 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.49■■□□□ 1.03
HOXC6P09630 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 AC004870.1-201ENST00000315132 882 ntBASIC21.49■■□□□ 1.03
HOXC6P09630 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 UNC93B7-201ENST00000509439 705 ntBASIC21.49■■□□□ 1.03
HOXC6P09630 MIR3180-5-201ENST00000583743 153 ntBASIC21.49■■□□□ 1.03
HOXC6P09630 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HOXC6P09630 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.49■■□□□ 1.03
HOXC6P09630 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 AC079602.3-201ENST00000623931 403 ntBASIC21.49■■□□□ 1.03
HOXC6P09630 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HOXC6P09630 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HOXC6P09630 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.49■■□□□ 1.03
HOXC6P09630 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC6P09630 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms