Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 CKBP1-201ENST00000565489 1086 ntBASIC19.33■□□□□ 0.68
HLA-DQB2P05538 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 MIR4785-201ENST00000585005 73 ntBASIC19.32■□□□□ 0.68
HLA-DQB2P05538 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 DGCR10-201ENST00000609839 495 ntBASIC19.32■□□□□ 0.68
HLA-DQB2P05538 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DQB2P05538 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DQB2P05538 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 MIR4497-201ENST00000583208 89 ntBASIC19.3■□□□□ 0.68
HLA-DQB2P05538 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 AC096733.2-201ENST00000609937 1394 ntBASIC19.3■□□□□ 0.68
HLA-DQB2P05538 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DQB2P05538 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 RBM17P1-201ENST00000453646 1190 ntBASIC19.29■□□□□ 0.68
HLA-DQB2P05538 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 AC097488.1-201ENST00000507834 756 ntBASIC19.29■□□□□ 0.68
HLA-DQB2P05538 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.29■□□□□ 0.68
HLA-DQB2P05538 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms