Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CPNE3O75131 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPNE3O75131 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE3O75131 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CPNE3O75131 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE3O75131 INGX-201ENST00000359239 846 ntBASIC18.25■□□□□ 0.51
CPNE3O75131 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.25■□□□□ 0.51
CPNE3O75131 DUX4L26-201ENST00000489078 1255 ntBASIC18.25■□□□□ 0.51
CPNE3O75131 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.25■□□□□ 0.51
CPNE3O75131 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.25■□□□□ 0.51
CPNE3O75131 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE3O75131 AC010653.2-201ENST00000623505 997 ntBASIC18.25■□□□□ 0.51
CPNE3O75131 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE3O75131 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE3O75131 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE3O75131 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPNE3O75131 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE3O75131 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE3O75131 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE3O75131 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPNE3O75131 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE3O75131 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CPNE3O75131 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CPNE3O75131 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE3O75131 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CPNE3O75131 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 TSPY17P-201ENST00000450329 467 ntBASIC18.24■□□□□ 0.51
CPNE3O75131 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.24■□□□□ 0.51
CPNE3O75131 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.24■□□□□ 0.51
CPNE3O75131 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.24■□□□□ 0.51
CPNE3O75131 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.24■□□□□ 0.51
CPNE3O75131 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE3O75131 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CPNE3O75131 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CPNE3O75131 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE3O75131 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.24■□□□□ 0.51
CPNE3O75131 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CPNE3O75131 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CPNE3O75131 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE3O75131 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.23■□□□□ 0.51
CPNE3O75131 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 KRT8P41-201ENST00000533985 1514 ntBASIC18.23■□□□□ 0.51
CPNE3O75131 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 AC099778.1-201ENST00000568593 1911 ntBASIC18.23■□□□□ 0.51
CPNE3O75131 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE3O75131 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CPNE3O75131 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CPNE3O75131 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE3O75131 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CPNE3O75131 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE3O75131 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE3O75131 BX664615.1-201ENST00000443558 458 ntBASIC18.23■□□□□ 0.51
CPNE3O75131 CA15P1-201ENST00000481698 905 ntBASIC18.23■□□□□ 0.51
CPNE3O75131 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE3O75131 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CPNE3O75131 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE3O75131 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE3O75131 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CPNE3O75131 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE3O75131 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CPNE3O75131 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE3O75131 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE3O75131 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CPNE3O75131 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.22■□□□□ 0.51
CPNE3O75131 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPNE3O75131 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE3O75131 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms