Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC32.62■■■□□ 2.81
CUX2O14529 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC32.62■■■□□ 2.81
CUX2O14529 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC32.62■■■□□ 2.81
CUX2O14529 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC32.62■■■□□ 2.81
CUX2O14529 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC32.62■■■□□ 2.81
CUX2O14529 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
CUX2O14529 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC32.62■■■□□ 2.81
CUX2O14529 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC32.62■■■□□ 2.81
CUX2O14529 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC32.62■■■□□ 2.81
CUX2O14529 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC32.62■■■□□ 2.81
CUX2O14529 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC32.62■■■□□ 2.81
CUX2O14529 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CUX2O14529 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
CUX2O14529 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CUX2O14529 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CUX2O14529 KRT8P11-201ENST00000409686 1436 ntBASIC32.62■■■□□ 2.81
CUX2O14529 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
CUX2O14529 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
CUX2O14529 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC32.61■■■□□ 2.81
CUX2O14529 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 AL355877.3-201ENST00000622820 899 ntBASIC32.61■■■□□ 2.81
CUX2O14529 AL157888.1-201ENST00000631930 593 ntBASIC32.61■■■□□ 2.81
CUX2O14529 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC32.61■■■□□ 2.81
CUX2O14529 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC32.61■■■□□ 2.81
CUX2O14529 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
CUX2O14529 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CUX2O14529 AC034105.1-201ENST00000563488 319 ntBASIC32.61■■■□□ 2.81
CUX2O14529 LITAF-220ENST00000620789 692 ntTSL 5 BASIC32.61■■■□□ 2.81
CUX2O14529 AC116407.3-201ENST00000623905 1129 ntBASIC32.61■■■□□ 2.81
CUX2O14529 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC32.61■■■□□ 2.81
CUX2O14529 EP400NL-214ENST00000641289 2402 ntBASIC32.6■■■□□ 2.81
CUX2O14529 AC104109.2-201ENST00000602919 1418 ntBASIC32.6■■■□□ 2.81
CUX2O14529 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC32.6■■■□□ 2.81
CUX2O14529 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CUX2O14529 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC32.6■■■□□ 2.81
CUX2O14529 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
CUX2O14529 LINC01465-201ENST00000408887 1940 ntBASIC32.59■■■□□ 2.81
CUX2O14529 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CUX2O14529 AC006128.1-201ENST00000624704 1661 ntBASIC32.59■■■□□ 2.81
CUX2O14529 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC32.59■■■□□ 2.81
CUX2O14529 AC004832.2-201ENST00000426397 482 ntBASIC32.59■■■□□ 2.81
CUX2O14529 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC32.59■■■□□ 2.81
CUX2O14529 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC32.59■■■□□ 2.81
CUX2O14529 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CUX2O14529 AC008608.2-201ENST00000606089 416 ntBASIC32.59■■■□□ 2.81
CUX2O14529 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC32.59■■■□□ 2.81
CUX2O14529 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
CUX2O14529 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC32.59■■■□□ 2.81
CUX2O14529 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
CUX2O14529 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC32.58■■■□□ 2.81
CUX2O14529 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
CUX2O14529 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC32.58■■■□□ 2.81
CUX2O14529 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CUX2O14529 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CUX2O14529 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CUX2O14529 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CUX2O14529 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC32.57■■■□□ 2.8
CUX2O14529 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC32.57■■■□□ 2.8
CUX2O14529 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC32.57■■■□□ 2.8
CUX2O14529 PUDP-206ENST00000540122 825 ntTSL 2 BASIC32.57■■■□□ 2.8
CUX2O14529 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC32.57■■■□□ 2.8
CUX2O14529 AC011467.4-201ENST00000594891 528 ntBASIC32.57■■■□□ 2.8
CUX2O14529 ORC5-208ENST00000626700 344 ntTSL 3 BASIC32.57■■■□□ 2.8
CUX2O14529 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC32.57■■■□□ 2.8
CUX2O14529 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CUX2O14529 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC32.56■■■□□ 2.8
CUX2O14529 AC007225.1-201ENST00000566331 1836 ntBASIC32.56■■■□□ 2.8
CUX2O14529 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC32.56■■■□□ 2.8
CUX2O14529 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC32.56■■■□□ 2.8
CUX2O14529 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CUX2O14529 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC32.56■■■□□ 2.8
CUX2O14529 SPCS2P1-201ENST00000561636 679 ntBASIC32.56■■■□□ 2.8
CUX2O14529 AP005901.3-202ENST00000581653 237 ntBASIC32.56■■■□□ 2.8
CUX2O14529 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
CUX2O14529 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC32.56■■■□□ 2.8
CUX2O14529 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC32.56■■■□□ 2.8
CUX2O14529 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC32.56■■■□□ 2.8
CUX2O14529 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC32.55■■■□□ 2.8
CUX2O14529 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CUX2O14529 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CUX2O14529 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC32.55■■■□□ 2.8
CUX2O14529 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CUX2O14529 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
CUX2O14529 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC32.55■■■□□ 2.8
CUX2O14529 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CUX2O14529 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC32.55■■■□□ 2.8
CUX2O14529 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC32.55■■■□□ 2.8
CUX2O14529 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC32.54■■■□□ 2.8
CUX2O14529 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC32.54■■■□□ 2.8
CUX2O14529 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC32.54■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms