Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 AC006128.1-201ENST00000624704 1661 ntBASIC18.63■□□□□ 0.57
C4orf47A7E2U8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 CHCHD2P8-201ENST00000429873 447 ntBASIC18.62■□□□□ 0.57
C4orf47A7E2U8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf47A7E2U8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.61■□□□□ 0.57
C4orf47A7E2U8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 AP000867.3-201ENST00000524675 377 ntBASIC18.61■□□□□ 0.57
C4orf47A7E2U8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf47A7E2U8 AC073314.1-201ENST00000568729 2216 ntBASIC18.61■□□□□ 0.57
C4orf47A7E2U8 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 AC024243.1-201ENST00000609234 778 ntBASIC18.6■□□□□ 0.57
C4orf47A7E2U8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C4orf47A7E2U8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 AL162741.1-201ENST00000565563 1558 ntBASIC18.59■□□□□ 0.57
C4orf47A7E2U8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C4orf47A7E2U8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms