Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GPR32P1-201ENST00000601788 811 ntBASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 AL591684.3-201ENST00000605187 298 ntBASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 AC116407.3-201ENST00000623905 1129 ntBASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TMEM88BA6NKF7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 AC004967.1-201ENST00000453589 447 ntBASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 RN7SL606P-201ENST00000472779 293 ntBASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 MIR3687-2-201ENST00000577708 61 ntBASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 AC008608.2-201ENST00000606089 416 ntBASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 MIR3687-1-201ENST00000614492 61 ntBASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.16■■□□□ 1.14
TMEM88BA6NKF7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 SCARNA2-201ENST00000458748 420 ntBASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 AL356488.2-201ENST00000602755 427 ntBASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 FAM197Y3-203ENST00000618346 717 ntBASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMEM88BA6NKF7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TMEM88BA6NKF7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.14■■□□□ 1.14
TMEM88BA6NKF7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.14■■□□□ 1.14
TMEM88BA6NKF7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 HTR5BP-201ENST00000430851 1154 ntBASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 AC112482.1-201ENST00000492080 688 ntBASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMEM88BA6NKF7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 KRT18P23-201ENST00000435622 1283 ntBASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 AC244107.1-201ENST00000442033 332 ntBASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 AC091607.1-201ENST00000490318 1060 ntBASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 AC145285.3-201ENST00000564603 959 ntBASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.13■■□□□ 1.13
TMEM88BA6NKF7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 SMG8-203ENST00000578922 2178 ntBASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 MED15P5-201ENST00000423150 992 ntBASIC22.12■■□□□ 1.13
TMEM88BA6NKF7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms