Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 EGLN1P1-201ENST00000531623 762 ntBASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 AC141586.3-201ENST00000562166 1838 ntBASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV25A0A0B4J276 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 TSPY14P-201ENST00000303979 915 ntBASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 TSPY17P-201ENST00000450329 467 ntBASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 AC116562.4-202ENST00000641738 218 ntBASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 AFG3L1P-217ENST00000557444 2447 ntBASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV25A0A0B4J276 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 AC087499.1-201ENST00000418141 1075 ntBASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 TSPY15P-201ENST00000457163 923 ntBASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV25A0A0B4J276 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 TEX21P-204ENST00000641479 1693 ntBASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 FEM1AP3-201ENST00000403722 1741 ntBASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms