Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC004584.2-201ENST00000570407 410 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 AC005951.2-201ENST00000576282 495 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 CPDP1-201ENST00000579660 283 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 MIR1244-1-201ENST00000612829 85 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 MIR1244-3-201ENST00000635744 85 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 MIR1244-2-201ENST00000636449 85 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 MIR1244-4-202ENST00000636813 85 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 RNU6-837P-201ENST00000391056 108 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 RPL21P17-201ENST00000397467 475 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AL591034.2-201ENST00000402839 359 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AL590135.1-201ENST00000422215 156 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 MTND5P15-201ENST00000434246 349 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 ABCF2P2-201ENST00000450549 296 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AC108751.2-201ENST00000469993 231 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 RPL23AP65-201ENST00000475608 468 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 RNU6-138P-201ENST00000515952 107 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 SNORD116-26-201ENST00000516006 96 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 RNU6-570P-201ENST00000517051 105 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AP003733.2-201ENST00000529409 171 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 RRN3P3-201ENST00000549207 578 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 MIR3976-201ENST00000606807 139 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AC034102.8-201ENST00000615146 484 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 Z82217.1-201ENST00000625157 8149 ntBASIC5.13□□□□□ -1.59
RTCBQ9Y3I0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 RNU6-1179P-201ENST00000384667 107 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 SNORA3.3-201ENST00000408712 125 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 RPS20P1-201ENST00000434853 354 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 RANP8-201ENST00000444720 713 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 RPL29P29-201ENST00000448725 423 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 AL451050.1-201ENST00000450126 415 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 AL445433.1-201ENST00000457507 257 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 TRBVB-201ENST00000477100 408 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 GZMAP1-201ENST00000503054 631 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 AC108145.1-201ENST00000503770 153 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 RNU6-911P-201ENST00000516523 104 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 SNORA70.24-201ENST00000517233 118 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 RNA5SP179-201ENST00000517284 121 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 AC087499.8-201ENST00000578406 226 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 MIR3200-201ENST00000580767 85 ntBASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.12□□□□□ -1.59
RTCBQ9Y3I0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 RNA5SP52-201ENST00000362448 134 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 U8.8-201ENST00000365399 135 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 RNU6-33P-201ENST00000384793 107 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 MIR548M-201ENST00000408260 86 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 HMGN2P31-201ENST00000432430 273 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 LINC01399-202ENST00000458450 244 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 RNU6-1037P-201ENST00000459571 107 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 HMGN2P13-201ENST00000476476 274 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 APOOP4-201ENST00000513530 597 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 RNU6-182P-201ENST00000516970 105 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 RNU6-111P-201ENST00000517179 105 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AC109329.1-201ENST00000518744 317 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AC012433.1-201ENST00000588916 398 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AL158827.2-201ENST00000602494 330 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AC091167.4-201ENST00000605079 184 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AL691447.3-201ENST00000635020 330 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 AL512643.1-201ENST00000635735 524 ntBASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTCBQ9Y3I0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms