Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AL357552.1-201ENST00000445254 415 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4□□□□□ -1.77
USP25Q9UHP3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4□□□□□ -1.77
USP25Q9UHP3 AL162395.1-201ENST00000457882 422 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AP002812.1-201ENST00000495378 474 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AC006445.2-201ENST00000510061 472 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AC098591.2-201ENST00000510152 315 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 PHBP14-201ENST00000512887 367 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AC093331.1-201ENST00000521474 169 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP25Q9UHP3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP25Q9UHP3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4□□□□□ -1.77
USP25Q9UHP3 HMGB1P14-201ENST00000557424 591 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4□□□□□ -1.77
USP25Q9UHP3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4□□□□□ -1.77
USP25Q9UHP3 AC006130.2-201ENST00000586202 326 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AC067852.3-201ENST00000589177 561 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 uc_338.34-201ENST00000617467 174 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 U6.114-201ENST00000636407 96 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP25Q9UHP3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4□□□□□ -1.77
USP25Q9UHP3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
USP25Q9UHP3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4□□□□□ -1.77
USP25Q9UHP3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 AC121333.1-201ENST00000567488 2709 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 SNORA63-201ENST00000363450 132 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 RNU6-188P-201ENST00000364207 107 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 SMIM11P1-201ENST00000369586 178 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP25Q9UHP3 AL592114.1-201ENST00000403842 483 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 SNRPFP3-201ENST00000457792 225 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 RNU6-953P-201ENST00000459154 107 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 RNU7-66P-201ENST00000459469 62 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 KC877373.1-201ENST00000479066 408 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 AC007991.1-201ENST00000522680 631 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 MIR3609-201ENST00000582661 80 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 AC174048.1-201ENST00000603389 144 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 AC007619.2-201ENST00000605743 379 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 AC126177.8-201ENST00000618339 1015 ntBASIC3.99□□□□□ -1.77
USP25Q9UHP3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.99□□□□□ -1.77
USP25Q9UHP3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC007823.1-201ENST00000569932 1566 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 RNA5SP383-201ENST00000362934 120 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 MIR554-201ENST00000384874 96 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 RNU6-817P-201ENST00000391083 104 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 RN7SKP202-201ENST00000410439 330 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 RNU4-46P-201ENST00000410818 138 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC126124.2-201ENST00000413542 321 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC114491.1-201ENST00000416095 246 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC245291.1-201ENST00000419501 328 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC092047.1-201ENST00000424997 240 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC005534.2-201ENST00000431047 433 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 RPS29P7-201ENST00000439662 171 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 MTCYBP6-201ENST00000441810 138 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC104027.1-201ENST00000521887 300 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AL137161.1-201ENST00000532231 390 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 MIR4429-201ENST00000580105 73 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 AL365204.3-201ENST00000612448 685 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AC104237.2-201ENST00000612456 443 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 AL138880.2-201ENST00000616214 239 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 SNORA50A-202ENST00000629536 136 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
USP25Q9UHP3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP25Q9UHP3 API5P2-201ENST00000397055 1498 ntBASIC3.98□□□□□ -1.77
USP25Q9UHP3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP25Q9UHP3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP25Q9UHP3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP25Q9UHP3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP25Q9UHP3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP25Q9UHP3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP25Q9UHP3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms