Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 NDUFB4P7-201ENST00000423198 363 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 SDAD1P3-201ENST00000427380 333 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 AL513124.1-201ENST00000450410 614 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 snoU13.4-201ENST00000458916 104 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AP000873.1-201ENST00000463987 400 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC109327.1-201ENST00000471666 403 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC022795.1-201ENST00000473808 480 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 RNU6-789P-201ENST00000517105 102 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 SNORA81.3-201ENST00000517283 198 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AP004242.1-201ENST00000533701 349 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC022080.3-201ENST00000544433 482 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC104581.2-201ENST00000572227 430 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC136624.4-201ENST00000573044 370 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AL512605.2-201ENST00000592972 256 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC006557.5-201ENST00000603126 811 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 uc_338.13-201ENST00000618243 179 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
CNTN3Q9P232 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTN3Q9P232 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTN3Q9P232 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CNTN3Q9P232 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 MIR331-201ENST00000362302 94 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 Y_RNA.29-201ENST00000362570 113 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 SNORD81.1-201ENST00000363064 77 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 RNU6-338P-201ENST00000383888 105 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 Y_RNA.439-201ENST00000384119 94 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 RNU6-708P-201ENST00000384217 107 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 MIR10A-201ENST00000385043 110 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 MIR607-201ENST00000385241 96 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 RNA5SP372-201ENST00000390836 115 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 SNORA11F-201ENST00000408237 128 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 RNA5SP146-201ENST00000410743 123 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 SNORA74C-2-201ENST00000411179 201 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 Z85995.1-201ENST00000415547 335 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 MTND3P9-201ENST00000429526 346 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 HIGD1AP2-201ENST00000446367 280 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC079354.2-201ENST00000453523 154 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 RPL31P13-201ENST00000484151 370 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC087190.1-201ENST00000484462 480 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC107032.1-201ENST00000485945 480 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 RPS23P5-201ENST00000495419 428 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC023575.1-201ENST00000580510 358 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC114781.5-201ENST00000615297 108 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC137590.2-201ENST00000619709 240 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 MIR6830-201ENST00000636015 70 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC006971.1-201ENST00000407916 4486 ntBASIC4.77□□□□□ -1.65
CNTN3Q9P232 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CNTN3Q9P232 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CNTN3Q9P232 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTN3Q9P232 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 RNU6-227P-201ENST00000362865 103 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.76□□□□□ -1.65
CNTN3Q9P232 MIR708-201ENST00000390708 88 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 SNORD115-46-201ENST00000390982 71 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 SNORA12.2-201ENST00000391040 156 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 SNORD58.1-201ENST00000391313 66 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 RNA5SP239-201ENST00000410218 129 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 RN7SKP177-201ENST00000410567 355 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 RPL21P66-201ENST00000426566 466 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AC098869.1-201ENST00000481627 292 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 HMGB1P22-201ENST00000505315 124 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 RNU6-377P-201ENST00000515965 102 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 RNA5SP290-201ENST00000517133 127 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 AC025755.1-201ENST00000521306 278 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 TRAV8-5-201ENST00000537369 341 ntBASIC4.76□□□□□ -1.65
CNTN3Q9P232 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms