Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AC008526.1-201ENST00000509149 338 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 RNU6-277P-201ENST00000516272 106 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AP003730.1-201ENST00000524605 285 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 COPS8P3-201ENST00000526024 482 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 CYCSP39-201ENST00000565821 309 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AC138761.3-201ENST00000579993 334 ntBASIC3.78□□□□□ -1.8
MKS1Q9NXB0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.78□□□□□ -1.8
MKS1Q9NXB0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 Z98749.2-208ENST00000381646 500 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 Y_RNA.474-201ENST00000384341 102 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 Y_RNA.509-201ENST00000384506 99 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 RPL5P18-201ENST00000406671 891 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 MIR548K-201ENST00000408406 116 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 snoU13.28-201ENST00000459235 104 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 RPL23AP14-201ENST00000468281 468 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 HMGN1P11-201ENST00000508668 303 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AC093331.1-201ENST00000521474 169 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 OR1M4P-201ENST00000589199 287 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AC068790.4-201ENST00000602474 263 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 RMST_8.1-201ENST00000610287 165 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 MIR1302-1-201ENST00000637932 143 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 AC007496.3-201ENST00000624987 3443 ntBASIC3.77□□□□□ -1.81
MKS1Q9NXB0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
MKS1Q9NXB0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 MTND5P7-201ENST00000413558 1798 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC006504.1-201ENST00000562493 3666 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RNU6-562P-201ENST00000362731 107 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RNU6-214P-201ENST00000384130 107 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 SNORA48.8-201ENST00000391324 134 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AL139396.1-201ENST00000421137 167 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RPL7P37-201ENST00000425095 738 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 TOMM20P4-201ENST00000427861 435 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 NUTF2P3-201ENST00000448540 384 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC010099.1-201ENST00000455434 375 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RPL26P9-201ENST00000457466 433 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RN7SL459P-201ENST00000481078 302 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC006483.1-201ENST00000487308 313 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RPS29P20-201ENST00000489592 171 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RPS27AP10-201ENST00000496103 208 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC026801.1-201ENST00000497178 464 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AP005597.4-201ENST00000526762 229 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AP005639.2-201ENST00000527592 928 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AP000867.2-201ENST00000532468 320 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC093027.1-201ENST00000546698 429 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AL391261.3-201ENST00000557194 520 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 MIR4790-201ENST00000577799 79 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC100830.2-201ENST00000581636 240 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 MIR4795-201ENST00000584182 89 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC123912.5-201ENST00000605470 343 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 SNORA62.6-201ENST00000606322 83 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC099778.2-201ENST00000610904 211 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 AC006111.3-201ENST00000622137 383 ntBASIC3.76□□□□□ -1.81
MKS1Q9NXB0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MKS1Q9NXB0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms