Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU4-42P-201ENST00000364738 142 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 SNORD65.1-201ENST00000390889 71 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 RNU6-754P-201ENST00000391166 107 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 RPL7P27-201ENST00000403775 720 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 BTF3P4-201ENST00000418852 495 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 ELOCP14-201ENST00000428070 331 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 NANOGP2-201ENST00000435391 727 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 MTND4P6-201ENST00000438297 472 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 ELOCP7-201ENST00000439968 331 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 RNU6-714P-201ENST00000516963 103 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 VN1R80P-201ENST00000597126 338 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC004805.2-201ENST00000605382 482 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC026741.1-201ENST00000605892 482 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AL445264.1-201ENST00000621719 171 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC093875.1-201ENST00000623688 504 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC007490.1-201ENST00000624321 703 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
CISHQ9NSE2 CDC27P3-201ENST00000635418 1910 ntBASIC1.44□□□□□ -2.18
CISHQ9NSE2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC131280.1-202ENST00000624067 4211 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 RNU6-707P-201ENST00000364647 95 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 RNU6-354P-201ENST00000383862 107 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 RNU6-203P-201ENST00000384038 104 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 RNU6-610P-201ENST00000384264 107 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 OR9R1P-201ENST00000412200 877 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 MTND1P21-201ENST00000412991 285 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 TPMTP2-201ENST00000414372 726 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC009238.1-201ENST00000442165 424 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 MTND6P13-201ENST00000443510 523 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC009237.6-201ENST00000446969 424 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 HMGN2P10-201ENST00000448085 265 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC117503.1-201ENST00000472241 394 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 FO393415.2-201ENST00000480085 343 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 RNU6-991P-201ENST00000516168 107 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AP003033.1-201ENST00000527244 415 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CISHQ9NSE2 MRPS36P5-201ENST00000551909 298 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC021739.1-201ENST00000559631 174 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC122134.1-202ENST00000569111 1201 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AL031274.2-201ENST00000599419 203 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AL355598.1-201ENST00000604169 202 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC091152.3-201ENST00000604227 325 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC069304.2-201ENST00000605154 435 ntBASIC1.43□□□□□ -2.18
CISHQ9NSE2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.43□□□□□ -2.18
CISHQ9NSE2 RNU6-223P-201ENST00000362830 107 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 Y_RNA.245-201ENST00000364493 95 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 RNA5SP240-201ENST00000365355 128 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 RNU6-468P-201ENST00000384003 109 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 RNU6-19P-201ENST00000384718 107 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AL590084.2-201ENST00000401481 382 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 TXNP7-201ENST00000406296 293 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 RNU6-516P-201ENST00000411381 104 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 MTCO1P3-201ENST00000429327 192 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.42□□□□□ -2.18
CISHQ9NSE2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.42□□□□□ -2.18
CISHQ9NSE2 BX322784.1-201ENST00000455793 1077 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AC005410.1-202ENST00000460347 485 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.42□□□□□ -2.18
CISHQ9NSE2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.42□□□□□ -2.18
CISHQ9NSE2 RPL22P13-201ENST00000493291 347 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 HMGB1P35-201ENST00000503360 598 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AC006199.1-201ENST00000548728 219 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 HIGD1AP17-201ENST00000554576 276 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 HSBP1P1-201ENST00000555205 166 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AL139344.1-201ENST00000605228 195 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AC011939.3-201ENST00000613686 466 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AC003001.2-201ENST00000616294 831 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 AC079416.3-201ENST00000624479 549 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 CDR1-202ENST00000625883 1485 ntBASIC1.42□□□□□ -2.18
CISHQ9NSE2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.41□□□□□ -2.18
CISHQ9NSE2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
CISHQ9NSE2 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CISHQ9NSE2 MIR378A-201ENST00000362177 66 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 RNU6-207P-201ENST00000384137 107 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 SNORA8-201ENST00000384574 139 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CISHQ9NSE2 PGBD4P6-201ENST00000421501 610 ntBASIC1.41□□□□□ -2.18
CISHQ9NSE2 AL353729.1-201ENST00000425044 720 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms