Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC104763.2-201ENST00000604179 382 ntBASIC3.65□□□□□ -1.83
VPS16Q9H269 AC104237.2-201ENST00000612456 443 ntBASIC3.65□□□□□ -1.83
VPS16Q9H269 AC093913.1-201ENST00000614178 329 ntBASIC3.65□□□□□ -1.83
VPS16Q9H269 AC039056.2-201ENST00000622261 511 ntBASIC3.65□□□□□ -1.83
VPS16Q9H269 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS16Q9H269 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS16Q9H269 AC009093.8-201ENST00000641769 292 ntBASIC3.65□□□□□ -1.83
VPS16Q9H269 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VPS16Q9H269 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
VPS16Q9H269 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
VPS16Q9H269 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS16Q9H269 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS16Q9H269 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU1-70P-201ENST00000362618 164 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 SMIM11P1-201ENST00000369586 178 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU6-946P-201ENST00000383878 107 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU6-38P-201ENST00000384085 107 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 MIR493-201ENST00000385254 89 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 MIR454-201ENST00000390180 115 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 SNORA75.4-201ENST00000391278 119 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS16Q9H269 RNA5SP44-201ENST00000410446 133 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 YPEL5P1-201ENST00000419731 367 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 ERLEC1P1-201ENST00000433806 578 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 AC009237.8-201ENST00000445492 379 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU6-333P-201ENST00000459117 107 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU6-953P-201ENST00000459154 107 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 HMGB3P15-201ENST00000507326 574 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 FCF1P8-201ENST00000510322 597 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU4-29P-201ENST00000515943 174 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 SNORA31.3-201ENST00000516029 96 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU6-1045P-201ENST00000516321 107 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU6-1256P-201ENST00000516539 103 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 SCARNA20.6-201ENST00000517251 106 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS16Q9H269 SYF2P1-201ENST00000550658 413 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS16Q9H269 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS16Q9H269 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 AC090132.2-201ENST00000615881 347 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
VPS16Q9H269 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
VPS16Q9H269 SRP72P2-201ENST00000344851 1979 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS16Q9H269 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS16Q9H269 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS16Q9H269 RNU6-179P-201ENST00000363350 107 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 RNU6-522P-201ENST00000364497 107 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 BX323014.1-201ENST00000412876 237 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 NCOR1P3-201ENST00000420479 303 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS16Q9H269 CST9LP2-201ENST00000437612 320 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AL133547.1-201ENST00000448546 220 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC125238.1-201ENST00000448842 249 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS16Q9H269 AL590639.1-201ENST00000456484 337 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 PPP1R2P5-201ENST00000457256 603 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 RPS29P15-201ENST00000458329 171 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC007547.1-201ENST00000462177 490 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC087588.1-201ENST00000462203 316 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 FTH1P2-201ENST00000466086 412 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 RPS20P22-201ENST00000473700 357 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC106707.2-201ENST00000484182 374 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC092436.1-201ENST00000506450 503 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC105417.1-201ENST00000514691 285 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS16Q9H269 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS16Q9H269 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS16Q9H269 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS16Q9H269 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS16Q9H269 BNIP3P22-201ENST00000593399 556 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 DPPA3P3-201ENST00000603842 430 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC116312.1-201ENST00000606841 314 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 uc_338.1-201ENST00000612113 180 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AL034408.1-202ENST00000636088 415 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AC012442.3-202ENST00000636742 206 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS16Q9H269 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS16Q9H269 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS16Q9H269 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
VPS16Q9H269 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
VPS16Q9H269 AL136164.4-201ENST00000625013 2135 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS16Q9H269 AL139276.1-201ENST00000311910 1001 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNU6-552P-201ENST00000362869 119 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNA5SP383-201ENST00000362934 120 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 Y_RNA.216-201ENST00000364205 93 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNU6-805P-201ENST00000365643 106 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS16Q9H269 Y_RNA.387-201ENST00000383918 102 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNU6-474P-201ENST00000384243 107 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNU6-738P-201ENST00000384531 106 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 MIR134-201ENST00000385258 73 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 Y_RNA.579-201ENST00000390939 94 ntBASIC3.62□□□□□ -1.83
VPS16Q9H269 RNU6-817P-201ENST00000391083 104 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms