Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC144833.1-201ENST00000567953 4089 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 ZNF204P-201ENST00000416749 2397 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 AL450326.2-201ENST00000421913 1962 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 AL079305.1-201ENST00000623159 3008 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 AC092593.1-201ENST00000515413 1815 ntBASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CNTNAP3Q9BZ76 UBE2L2-201ENST00000254302 429 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 Y_RNA.111-201ENST00000363248 100 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 Y_RNA.495-201ENST00000384435 112 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 RNY4P29-201ENST00000410801 97 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 HMGN2P27-201ENST00000427352 270 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AC092991.1-201ENST00000477176 376 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 RN7SL132P-201ENST00000478131 296 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 RN7SKP276-201ENST00000516242 268 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 RN7SKP272-201ENST00000516988 232 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 FTH1P11-201ENST00000517577 551 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AP001880.2-201ENST00000538233 448 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AL121603.1-201ENST00000553815 142 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AL157871.3-201ENST00000557231 293 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 MIR1273C-201ENST00000578669 77 ntBASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP3Q9BZ76 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 AL353796.1-201ENST00000561542 3241 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 RNU6-1272P-201ENST00000362776 107 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 RNU6-381P-201ENST00000391259 108 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 AL592045.1-201ENST00000429867 352 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 AL358472.1-201ENST00000431295 329 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 PHBP16-201ENST00000446318 950 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 RN7SL319P-201ENST00000480656 221 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CNTNAP3Q9BZ76 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 RNA5SP509-201ENST00000364577 119 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 SNORA70F-201ENST00000384142 135 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 MIR634-201ENST00000385208 97 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 RNU6-578P-201ENST00000390980 103 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 RNY4P30-201ENST00000410216 95 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AL158823.1-201ENST00000418441 478 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AC007161.1-204ENST00000423039 460 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 RPS15AP5-201ENST00000436276 388 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 Z82210.1-201ENST00000440037 231 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AC009296.1-201ENST00000443146 155 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 HSPE1P6-201ENST00000479457 291 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AK3P2-201ENST00000507976 429 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 SNORA31.9-201ENST00000516429 84 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AP003327.1-201ENST00000529684 127 ntBASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP3Q9BZ76 MIR6133-201ENST00000617057 108 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms