Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 KC877982.1-201ENST00000602313 470 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 AC005332.10-201ENST00000612725 619 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.27□□□□□ -2.05
NPAS2Q99743 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
NPAS2Q99743 AC104454.1-201ENST00000421341 1401 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNU6-486P-201ENST00000363116 107 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNU6-188P-201ENST00000364207 107 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNU6-14P-201ENST00000384630 106 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNU6-19P-201ENST00000384718 107 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNU6-253P-201ENST00000384730 105 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC078974.1-201ENST00000411597 223 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AC098592.1-201ENST00000419352 333 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AC005005.2-201ENST00000420779 380 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL109913.1-201ENST00000421173 514 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 BX276092.3-201ENST00000424182 230 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RPL30P4-201ENST00000429309 333 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.26□□□□□ -2.05
NPAS2Q99743 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.26□□□□□ -2.05
NPAS2Q99743 FABP5P14-201ENST00000437273 393 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL008629.1-201ENST00000438615 184 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 BRK1P2-201ENST00000442875 223 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.26□□□□□ -2.05
NPAS2Q99743 LINC00888-204ENST00000487386 421 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.26□□□□□ -2.05
NPAS2Q99743 RNA5SP112-201ENST00000515937 99 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 SNORA3.4-201ENST00000515969 96 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNU1-41P-201ENST00000516161 162 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNU1-48P-201ENST00000516400 162 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
NPAS2Q99743 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AP005902.1-201ENST00000521358 186 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.26□□□□□ -2.05
NPAS2Q99743 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AP000889.2-201ENST00000532684 490 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NPAS2Q99743 AC009094.1-201ENST00000564443 426 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL356432.3-201ENST00000568952 465 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 ROCK1P1-201ENST00000573767 549 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 SNORD53-201ENST00000579969 78 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC105245.1-201ENST00000581934 244 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AC073544.2-201ENST00000601155 540 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL670379.6-201ENST00000603753 252 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL670379.11-201ENST00000604059 253 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL358072.1-201ENST00000604156 575 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC008162.1-201ENST00000604718 254 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL670379.1-201ENST00000604752 252 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC018714.1-201ENST00000605028 208 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL670379.5-201ENST00000605253 252 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL670379.12-201ENST00000605291 253 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL670379.8-201ENST00000605353 252 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AL670379.7-201ENST00000605823 252 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AC011890.2-201ENST00000613393 294 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 AC007671.2-201ENST00000637344 619 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NPAS2Q99743 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.26□□□□□ -2.05
NPAS2Q99743 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NPAS2Q99743 AC006020.1-201ENST00000420179 1854 ntBASIC2.26□□□□□ -2.05
NPAS2Q99743 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.26□□□□□ -2.05
NPAS2Q99743 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
NPAS2Q99743 AL109809.4-201ENST00000603520 2185 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
NPAS2Q99743 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 SNORD114-30-201ENST00000364448 72 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 RNU6-660P-201ENST00000364566 109 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 MIR218-1-201ENST00000384999 110 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 MIR147B-201ENST00000390185 80 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 SNORA3.2-201ENST00000408221 125 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.25□□□□□ -2.05
NPAS2Q99743 CYCSP48-201ENST00000417124 323 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC003685.2-201ENST00000422795 395 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AL593851.1-201ENST00000426171 157 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC007560.1-201ENST00000426912 237 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 NEFMP1-201ENST00000443423 1006 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AL606662.1-201ENST00000445763 553 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 SNORD97-201ENST00000459187 142 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.25□□□□□ -2.05
NPAS2Q99743 DYNLL1P5-201ENST00000467158 270 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.25□□□□□ -2.05
NPAS2Q99743 RPL39P36-201ENST00000490784 156 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC139453.3-201ENST00000493276 369 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 RN7SL636P-201ENST00000497504 294 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AC234781.5-201ENST00000508429 271 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.25□□□□□ -2.05
NPAS2Q99743 HMGB3P3-201ENST00000510526 400 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.25□□□□□ -2.05
NPAS2Q99743 MIR892C-201ENST00000516410 77 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms