Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-CQ95604 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-CQ95604 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-CQ95604 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-CQ95604 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HLA-CQ95604 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 RNU6-1141P-201ENST00000364520 107 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 RNU6-1310P-201ENST00000384153 107 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 RNU2-2P-201ENST00000410396 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-CQ95604 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-CQ95604 AC112220.1-201ENST00000434628 355 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 AC009237.8-201ENST00000445492 379 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 SNORA84-201ENST00000459229 133 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 AC090281.1-201ENST00000523019 276 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 MIR3939-201ENST00000582614 106 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.27□□□□□ -1.57
HLA-CQ95604 RNU2-4P-201ENST00000606190 192 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.15-201ENST00000611544 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 AC244107.2-201ENST00000611773 76 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.16-201ENST00000613119 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.12-201ENST00000613778 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.9-201ENST00000615427 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.11-201ENST00000616345 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.2-201ENST00000616535 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.3-201ENST00000617785 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.19-201ENST00000618602 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 RNU2-1-201ENST00000618664 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.6-201ENST00000619225 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.5-201ENST00000619465 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 U2.10-201ENST00000620268 191 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-CQ95604 AC104964.3-201ENST00000606115 2860 ntBASIC5.27□□□□□ -1.57
HLA-CQ95604 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-CQ95604 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
HLA-CQ95604 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-CQ95604 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-CQ95604 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-CQ95604 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
HLA-CQ95604 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-CQ95604 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 AL590240.1-201ENST00000334118 313 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 SNORD113.2-201ENST00000364166 89 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 MIR539-201ENST00000365690 78 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 SNORD116-14-201ENST00000383894 92 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 SNORD116-17-201ENST00000383929 92 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 SNORD116-15-201ENST00000384445 92 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 SNORD116-20-201ENST00000384529 92 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 SNORD116-19-201ENST00000384729 92 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 RPL30P13-201ENST00000418873 348 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 CR769767.1-201ENST00000436337 346 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-CQ95604 GPM6BP3-201ENST00000442797 145 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HLA-CQ95604 RNU6-625P-201ENST00000459412 107 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 RPL23AP14-201ENST00000468281 468 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 AC114982.1-201ENST00000469402 321 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 Y_RNA.719-201ENST00000517156 106 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 CR383656.8-201ENST00000549046 145 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 AC021231.3-201ENST00000558497 370 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-CQ95604 AC034105.4-201ENST00000568304 277 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-CQ95604 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-CQ95604 MARK2P15-201ENST00000432204 2186 ntBASIC5.26□□□□□ -1.57
HLA-CQ95604 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HLA-CQ95604 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HLA-CQ95604 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-CQ95604 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
HLA-CQ95604 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HLA-CQ95604 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-CQ95604 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 AC092268.1-201ENST00000342691 405 ntBASIC5.25□□□□□ -1.57
HLA-CQ95604 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-CQ95604 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-CQ95604 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-CQ95604 BTF3P11-201ENST00000426582 477 ntBASIC5.25□□□□□ -1.57
HLA-CQ95604 AC078809.1-201ENST00000427601 140 ntBASIC5.25□□□□□ -1.57
HLA-CQ95604 AC007969.2-201ENST00000441891 191 ntBASIC5.25□□□□□ -1.57
HLA-CQ95604 AL137159.1-201ENST00000452808 512 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms