Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AP005639.2-201ENST00000527592 928 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 FRG2DP-202ENST00000566967 323 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AP001836.1-201ENST00000604675 523 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 YPEL5P2-201ENST00000605553 359 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 Z82243.1-201ENST00000609432 473 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AP001350.1-201ENST00000601906 1524 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1287P-201ENST00000362914 107 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 Y_RNA.128-201ENST00000363391 112 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 RNU6-946P-201ENST00000383878 107 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1127P-201ENST00000384580 107 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1060P-201ENST00000384664 107 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 Y_RNA.579-201ENST00000390939 94 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 MIR1183-201ENST00000408856 89 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 RNU4-14P-201ENST00000410858 122 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 CALM2P2-201ENST00000428512 440 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC234775.1-201ENST00000454247 670 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 VN1R17P-201ENST00000472048 1090 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 RPL23AP55-201ENST00000498163 452 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 MTND5P5-201ENST00000503764 376 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 HMGB1P22-201ENST00000505315 124 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 Y_RNA.718-201ENST00000517110 102 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 IGKV2D-23-201ENST00000518179 286 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 OR5D17P-201ENST00000531492 978 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC012182.1-201ENST00000570133 895 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 MIR4276-201ENST00000584832 70 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC006557.5-201ENST00000603126 811 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 DPPA3P3-201ENST00000603842 430 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AL360085.1-201ENST00000604713 532 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AL162730.1-201ENST00000605734 292 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AL133215.3-201ENST00000609801 448 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC103705.1-201ENST00000619013 241 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC090971.5-201ENST00000621102 293 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 AC004925.1-201ENST00000624256 2706 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 PWAR6-201ENST00000552334 4618 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 USP8P1-201ENST00000494673 3183 ntBASIC3.37□□□□□ -1.87
ZNF548Q8NEK5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 SNORD113-7-201ENST00000363762 77 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RNU6-474P-201ENST00000384243 107 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1297P-201ENST00000384415 104 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 MIR548P-201ENST00000408336 84 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RN7SKP158-201ENST00000410453 326 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RNA5SP31-201ENST00000411144 127 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 POLHP1-201ENST00000411806 470 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AL137014.1-201ENST00000420490 1226 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RPL31P12-201ENST00000422587 358 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 MTND2P23-201ENST00000422990 651 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AC090774.1-201ENST00000435925 246 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RPS24P6-201ENST00000452670 400 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 Y_RNA.635-201ENST00000459041 101 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RPL21P8-201ENST00000465083 535 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 RPS29P2-201ENST00000479278 136 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 HMGB3P15-201ENST00000507326 574 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AC005741.1-201ENST00000511094 432 ntBASIC3.36□□□□□ -1.87
ZNF548Q8NEK5 AC026801.2-201ENST00000515352 425 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms