Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AC018865.2-201ENST00000423631 129 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AL592045.1-201ENST00000429867 352 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 HMGB1P27-201ENST00000431429 603 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 HMGN2P7-201ENST00000456186 273 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 MIR2053-201ENST00000459295 91 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC092451.1-201ENST00000480211 153 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AL049874.1-201ENST00000489560 388 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 RPL7P47-201ENST00000497299 556 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC092436.3-201ENST00000511788 257 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC087854.1-201ENST00000519706 414 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC025423.5-201ENST00000550230 219 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 LRRC37A5P-203ENST00000580181 585 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC008737.2-201ENST00000599446 118 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AP000942.4-201ENST00000604811 241 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC009229.3-201ENST00000608056 282 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 RNA5SP196-201ENST00000625967 102 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 MTND5P30-201ENST00000452896 1731 ntBASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.35□□□□□ -1.87
PNLDC1Q8NA58 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AL353746.1-201ENST00000566293 6881 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 RNA5SP97-201ENST00000365006 84 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 U3.15-201ENST00000365398 212 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 SNORA75B-201ENST00000384053 137 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 RNU6-890P-201ENST00000384121 107 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 Y_RNA.480-201ENST00000384364 102 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 Y_RNA.594-201ENST00000410373 140 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 RNU6-607P-201ENST00000411283 108 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC063979.1-201ENST00000415539 377 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 MTND3P2-201ENST00000438452 342 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 TXNP1-201ENST00000441872 371 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 NOTCH2P1-201ENST00000443481 624 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 CEACAMP4-201ENST00000457676 421 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC022493.1-201ENST00000492984 337 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC026801.1-201ENST00000497178 464 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 PTP4A1P4-201ENST00000512479 322 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 RN7SKP83-201ENST00000516512 178 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 IGKV2-23-201ENST00000518729 323 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC026371.1-201ENST00000551867 419 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 MED28P6-201ENST00000558776 231 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC090877.1-201ENST00000561418 344 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 SNORD84-203ENST00000584275 78 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC005255.1-201ENST00000593748 216 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AL606490.9-201ENST00000603331 271 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC098826.3-201ENST00000603823 466 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AC008121.3-201ENST00000618726 433 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 AL031601.2-202ENST00000622650 282 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 Z99571.1-201ENST00000636677 394 ntBASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PNLDC1Q8NA58 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PNLDC1Q8NA58 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PNLDC1Q8NA58 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.88
PNLDC1Q8NA58 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
PNLDC1Q8NA58 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 PWAR6-201ENST00000552334 4618 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 DEFB108F-201ENST00000344638 222 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RNU6-512P-201ENST00000364438 103 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RNA5SP479-201ENST00000364858 117 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RNU1-64P-201ENST00000365443 163 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RNA5SP283-201ENST00000365604 119 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RNU6-639P-201ENST00000384074 107 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RNU6-1050P-201ENST00000410388 107 ntBASIC3.33□□□□□ -1.88
PNLDC1Q8NA58 RNU4-6P-201ENST00000410804 122 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms