Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 SNRPGP16-201ENST00000533275 226 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AC007458.1-201ENST00000542812 373 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 MED28P6-201ENST00000558776 231 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AC106782.4-201ENST00000568264 210 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 MIR3672-201ENST00000584290 82 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 BRDTP1-201ENST00000605735 677 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 AL133255.1-201ENST00000606374 441 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 MIR15A-201ENST00000607334 83 ntBASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf139Q6ZV77 OR4G2P-202ENST00000641004 1759 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 MIR423-201ENST00000362201 94 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.387-201ENST00000383918 102 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RNU6-1013P-201ENST00000384180 107 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RNU6-393P-201ENST00000384475 107 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 MIR491-201ENST00000384877 84 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 MIR548K-201ENST00000408406 116 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AL160275.3-201ENST00000423876 471 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 HMGN2P20-201ENST00000437531 273 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AL118496.2-201ENST00000448300 230 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RPL23AP31-201ENST00000456160 467 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RNU6-953P-201ENST00000459154 107 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RN7SL807P-201ENST00000470923 297 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 MTCO1P29-201ENST00000496868 288 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 TRBVA-201ENST00000498804 316 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 HIGD1AP13-201ENST00000509878 289 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 TBCAP3-201ENST00000512475 312 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RNU6-927P-201ENST00000516199 100 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RN7SKP83-201ENST00000516512 178 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RNU6-256P-201ENST00000516747 97 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RNU6-566P-201ENST00000516790 107 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 SNORA70.24-201ENST00000517233 118 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AC008011.1-201ENST00000545989 227 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 MTCO3P23-201ENST00000561363 289 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AC006077.1-201ENST00000604746 343 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 AP001486.2-201ENST00000561652 5113 ntBASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf139Q6ZV77 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.138-201ENST00000363462 102 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.384-201ENST00000383909 102 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 RNU6-1227P-201ENST00000383981 107 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.534-201ENST00000384599 112 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 MIR514A1-201ENST00000385133 98 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 RNU6-328P-201ENST00000390887 106 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms