Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 RPL31P60-201ENST00000478450 367 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 AC105137.1-201ENST00000484355 562 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 AC007686.1-201ENST00000488511 463 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 RNU6-397P-201ENST00000516226 104 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 RN7SKP83-201ENST00000516512 178 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 SNORA31.22-201ENST00000517204 135 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 AP003730.1-201ENST00000524605 285 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 HSPE1P20-201ENST00000538133 289 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.23□□□□□ -1.73
NR1I3Q14994 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.23□□□□□ -1.73
NR1I3Q14994 AC006600.1-201ENST00000572529 153 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 MIR4273-201ENST00000582824 84 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 AC006504.1-201ENST00000562493 3666 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NR1I3Q14994 MTND5P27-201ENST00000428871 1720 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NR1I3Q14994 PRO1804-201ENST00000623780 2050 ntBASIC4.23□□□□□ -1.73
NR1I3Q14994 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.22□□□□□ -1.73
NR1I3Q14994 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NR1I3Q14994 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NR1I3Q14994 MIR423-201ENST00000362201 94 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 RNA5SP502-201ENST00000362694 119 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 Y_RNA.577-201ENST00000384794 101 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 AC063979.1-201ENST00000415539 377 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 DNAJC19P7-201ENST00000428811 344 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 HMGB1P27-201ENST00000431429 603 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.22□□□□□ -1.73
NR1I3Q14994 AC073910.1-201ENST00000445047 438 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.22□□□□□ -1.73
NR1I3Q14994 SNORA40.14-201ENST00000516543 86 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.22□□□□□ -1.73
NR1I3Q14994 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.22□□□□□ -1.73
NR1I3Q14994 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 BNIP3P5-201ENST00000562290 498 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.22□□□□□ -1.73
NR1I3Q14994 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.22□□□□□ -1.73
NR1I3Q14994 AL137849.1-201ENST00000604767 169 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 RAC1P9-201ENST00000604990 392 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 AC004805.2-201ENST00000605382 482 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 MIR3976-201ENST00000606807 139 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 AC005344.1-201ENST00000613391 459 ntBASIC4.22□□□□□ -1.73
NR1I3Q14994 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.22□□□□□ -1.73
NR1I3Q14994 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.22□□□□□ -1.73
NR1I3Q14994 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.22□□□□□ -1.73
NR1I3Q14994 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NR1I3Q14994 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NR1I3Q14994 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NR1I3Q14994 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NR1I3Q14994 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NR1I3Q14994 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
NR1I3Q14994 RNY1P16-201ENST00000363063 111 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 AL138885.1-201ENST00000405921 675 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 RNU6-325P-201ENST00000411132 105 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 CYCSP33-201ENST00000414485 327 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 AL451062.2-201ENST00000427515 271 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.21□□□□□ -1.74
NR1I3Q14994 AL590399.6-201ENST00000446396 307 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.21□□□□□ -1.74
NR1I3Q14994 AC113155.1-201ENST00000511141 769 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.21□□□□□ -1.74
NR1I3Q14994 GMPSP1-201ENST00000514075 579 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 RN7SKP209-201ENST00000516888 304 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.21□□□□□ -1.74
NR1I3Q14994 AC007991.1-201ENST00000522680 631 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.21□□□□□ -1.74
NR1I3Q14994 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.21□□□□□ -1.74
NR1I3Q14994 AC007375.1-201ENST00000554513 578 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.21□□□□□ -1.74
NR1I3Q14994 MIR5096-201ENST00000583713 70 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 AC068790.4-201ENST00000602474 263 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 MIR1244-1-201ENST00000612829 85 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 AL445567.2-201ENST00000618935 498 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 MIR1244-3-201ENST00000635744 85 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 MIR1244-2-201ENST00000636449 85 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 MIR1244-4-202ENST00000636813 85 ntBASIC4.21□□□□□ -1.74
NR1I3Q14994 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NR1I3Q14994 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.21□□□□□ -1.74
NR1I3Q14994 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NR1I3Q14994 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.21□□□□□ -1.74
NR1I3Q14994 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NR1I3Q14994 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NR1I3Q14994 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NR1I3Q14994 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.2□□□□□ -1.74
NR1I3Q14994 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
NR1I3Q14994 RNU6-76P-201ENST00000384060 104 ntBASIC4.2□□□□□ -1.74
NR1I3Q14994 SNORA70E-201ENST00000384492 135 ntBASIC4.2□□□□□ -1.74
NR1I3Q14994 RNU6-882P-201ENST00000391025 103 ntBASIC4.2□□□□□ -1.74
NR1I3Q14994 RNU2-64P-201ENST00000411315 191 ntBASIC4.2□□□□□ -1.74
NR1I3Q14994 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.2□□□□□ -1.74
NR1I3Q14994 RPS15AP6-201ENST00000420703 385 ntBASIC4.2□□□□□ -1.74
NR1I3Q14994 UBE2D3P2-201ENST00000424409 445 ntBASIC4.2□□□□□ -1.74
NR1I3Q14994 AC068287.1-201ENST00000430283 295 ntBASIC4.2□□□□□ -1.74
NR1I3Q14994 CKS1BP5-201ENST00000434172 273 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms