Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RNU6-339P-201ENST00000384310 107 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SCN7AQ01118 AC099548.1-201ENST00000421443 426 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN7AQ01118 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.88□□□□□ -2.27
SCN7AQ01118 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.88□□□□□ -2.27
SCN7AQ01118 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN7AQ01118 RNU6-989P-201ENST00000362756 107 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 RNA5SP499-201ENST00000363982 119 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 RNA5SP240-201ENST00000365355 128 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 U6atac.2-201ENST00000408644 118 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN7AQ01118 AC117454.1-201ENST00000491120 168 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 AC113398.2-201ENST00000507630 558 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 GAS5-AS1-201ENST00000602767 694 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 U4atac.1-201ENST00000618345 95 ntBASIC0.88□□□□□ -2.27
SCN7AQ01118 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SCN7AQ01118 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SCN7AQ01118 SNORA70.7-201ENST00000384159 133 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 RNU6-1235P-201ENST00000384559 107 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.87□□□□□ -2.27
SCN7AQ01118 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.87□□□□□ -2.27
SCN7AQ01118 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN7AQ01118 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN7AQ01118 RNU6-498P-201ENST00000459468 107 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN7AQ01118 SNORA44.1-201ENST00000517031 108 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 AC104997.1-201ENST00000519761 717 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 AC022616.2-201ENST00000523185 300 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.87□□□□□ -2.27
SCN7AQ01118 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN7AQ01118 BNIP3P25-201ENST00000596023 559 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 DUSP12P1-201ENST00000612874 516 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 AP003485.1-201ENST00000625093 753 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 AC092192.1-201ENST00000633154 1018 ntBASIC0.87□□□□□ -2.27
SCN7AQ01118 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SCN7AQ01118 HMGN2P39-201ENST00000398005 273 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 TAF9BP2-201ENST00000400856 499 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 RN7SKP200-201ENST00000410564 320 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 RN7SKP61-201ENST00000410642 295 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 RPL30P13-201ENST00000418873 348 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.86□□□□□ -2.27
SCN7AQ01118 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.86□□□□□ -2.27
SCN7AQ01118 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 RNU6-1095P-201ENST00000516148 108 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 SNORA31.13-201ENST00000516624 135 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 HAUS1P3-201ENST00000523909 662 ntBASIC0.86□□□□□ -2.27
SCN7AQ01118 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.86□□□□□ -2.27
SCN7AQ01118 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.86□□□□□ -2.27
SCN7AQ01118 RNU6-16P-201ENST00000384385 107 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 MIR1303-201ENST00000408625 86 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 AC093106.2-201ENST00000428212 385 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 RPL39P29-201ENST00000447779 157 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN7AQ01118 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.85□□□□□ -2.27
SCN7AQ01118 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SCN7AQ01118 RNU6-362P-201ENST00000516736 90 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 RNA5SP137-201ENST00000516833 135 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 RNU6-798P-201ENST00000516912 103 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 AC067904.2-201ENST00000517322 1283 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN7AQ01118 AC007151.1-201ENST00000572774 483 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.85□□□□□ -2.27
SCN7AQ01118 AC013468.1-201ENST00000608680 598 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 AL109933.3-201ENST00000619095 188 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 AC068057.2-201ENST00000624047 895 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 AC090517.3-201ENST00000625170 141 ntBASIC0.85□□□□□ -2.27
SCN7AQ01118 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SCN7AQ01118 RNU6-670P-201ENST00000364312 104 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 SSXP10-201ENST00000402595 565 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 RNA5SP193-201ENST00000410353 107 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 ZNF965P-201ENST00000432501 817 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 C1DP3-201ENST00000455013 423 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.84□□□□□ -2.27
SCN7AQ01118 AC021146.2-201ENST00000504736 556 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.84□□□□□ -2.27
SCN7AQ01118 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.84□□□□□ -2.27
SCN7AQ01118 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.84□□□□□ -2.27
SCN7AQ01118 AC022254.1-201ENST00000567857 235 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 AC074051.3-201ENST00000570238 358 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.84□□□□□ -2.27
SCN7AQ01118 AC007349.4-201ENST00000608114 532 ntBASIC0.84□□□□□ -2.27
SCN7AQ01118 BTF3L4P2-201ENST00000392798 346 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 RNU6-233P-201ENST00000410845 141 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 OR9R1P-201ENST00000412200 877 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.84□□□□□ -2.28
SCN7AQ01118 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.84□□□□□ -2.28
SCN7AQ01118 MIR892C-201ENST00000516410 77 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 AP003072.2-201ENST00000527756 676 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.84□□□□□ -2.28
SCN7AQ01118 NIFKP8-201ENST00000560500 874 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 AC012435.1-202ENST00000568772 240 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 AC012669.1-201ENST00000603209 283 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 AC090116.1-201ENST00000615679 446 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 AC008443.7-201ENST00000622195 246 ntBASIC0.84□□□□□ -2.28
SCN7AQ01118 OR5H6-203ENST00000642105 978 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms