Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF144AP50876 AL391516.1-201ENST00000554380 2449 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RNF144AP50876 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF144AP50876 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF144AP50876 AC110774.1-201ENST00000623567 2018 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF144AP50876 AL592437.2-201ENST00000421655 2434 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AL365440.1-201ENST00000436135 2167 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF144AP50876 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF144AP50876 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF144AP50876 RNU6-1272P-201ENST00000362776 107 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 RNU5B-2P-201ENST00000363036 113 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 RN7SKP153-201ENST00000365026 316 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 RNU6-80P-201ENST00000384195 107 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 MIR487A-201ENST00000385009 80 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 MIR513C-201ENST00000401352 84 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 U3.37-201ENST00000408528 213 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AL355433.1-201ENST00000422804 300 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AL356867.1-201ENST00000429623 299 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF144AP50876 RPS29P10-201ENST00000439197 166 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF144AP50876 AC010095.1-201ENST00000443543 144 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF144AP50876 RN7SL346P-201ENST00000491561 294 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AC020593.1-201ENST00000507399 299 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF144AP50876 ATP5LP3-201ENST00000514223 304 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF144AP50876 BX510359.5-201ENST00000515651 304 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 RNA5SP360-201ENST00000516555 118 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 RNU6-1234P-201ENST00000516877 103 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 IGKV2-18-201ENST00000522607 343 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AC107918.3-201ENST00000533272 382 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 MIR4472-2-201ENST00000582069 67 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF144AP50876 AC024153.1-201ENST00000603103 365 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF144AP50876 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF144AP50876 AL357075.2-201ENST00000614906 189 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 AC004825.2-201ENST00000616634 455 ntBASIC4.78□□□□□ -1.64
RNF144AP50876 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
RNF144AP50876 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RNF144AP50876 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF144AP50876 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF144AP50876 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF144AP50876 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
RNF144AP50876 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
RNF144AP50876 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF144AP50876 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF144AP50876 AC110491.1-201ENST00000562191 2010 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF144AP50876 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF144AP50876 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF144AP50876 AP001273.1-201ENST00000624493 3152 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 U3.3-201ENST00000362986 216 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 MIR539-201ENST00000365690 78 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 SNORA20-201ENST00000384662 132 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 MIR600-201ENST00000385007 98 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 RN7SKP16-201ENST00000410180 299 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 EIF4A1P3-201ENST00000411521 244 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 AC108075.1-201ENST00000424692 529 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 RAB28P5-201ENST00000427490 651 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 AC009963.2-201ENST00000453431 138 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 RPS26P39-201ENST00000469206 341 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 KC877373.1-201ENST00000479066 408 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 RNA5SP291-201ENST00000517222 105 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF144AP50876 AC112693.2-201ENST00000556538 232 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF144AP50876 MIR3921-201ENST00000577308 85 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF144AP50876 AC105254.2-201ENST00000603636 436 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF144AP50876 BX005214.3-202ENST00000619809 325 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 MIR6886-201ENST00000619864 61 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 AC092628.2-201ENST00000622492 339 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF144AP50876 AL359693.1-201ENST00000614959 2407 ntBASIC4.77□□□□□ -1.65
RNF144AP50876 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF144AP50876 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF144AP50876 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF144AP50876 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF144AP50876 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF144AP50876 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF144AP50876 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF144AP50876 SMG1P4-204ENST00000523028 4131 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 RNU6-275P-201ENST00000364910 107 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 RNU4-11P-201ENST00000365287 132 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 RN7SKP229-201ENST00000410465 302 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 RNA5SP31-201ENST00000411144 127 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF144AP50876 AL132838.2-201ENST00000492041 314 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 AC008953.1-201ENST00000497334 318 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 AC093840.1-201ENST00000511599 336 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 RNU6-966P-201ENST00000516479 104 ntBASIC4.76□□□□□ -1.65
RNF144AP50876 RNU7-121P-201ENST00000516604 62 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms