Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.14□□□□□ -1.91
RXRGP48443 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.14□□□□□ -1.91
RXRGP48443 RPL21P39-201ENST00000463605 483 ntBASIC3.14□□□□□ -1.91
RXRGP48443 RPL21P93-201ENST00000480465 489 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AC087190.1-201ENST00000484462 480 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AC093591.1-201ENST00000491435 481 ntBASIC3.14□□□□□ -1.91
RXRGP48443 RPL22P13-201ENST00000493291 347 ntBASIC3.14□□□□□ -1.91
RXRGP48443 RPL21P16-201ENST00000495531 483 ntBASIC3.14□□□□□ -1.91
RXRGP48443 ARL2BPP4-201ENST00000506854 471 ntBASIC3.14□□□□□ -1.91
RXRGP48443 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RXRGP48443 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.14□□□□□ -1.91
RXRGP48443 AC010493.1-201ENST00000513479 292 ntBASIC3.14□□□□□ -1.91
RXRGP48443 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.14□□□□□ -1.91
RXRGP48443 AC090572.1-201ENST00000519251 160 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AP003072.2-201ENST00000527756 676 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.14□□□□□ -1.91
RXRGP48443 MIR5692A1-201ENST00000580523 69 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AL645944.1-201ENST00000603857 493 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AP000787.2-201ENST00000604432 568 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AL022154.1-201ENST00000604698 785 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AC126118.1-201ENST00000607744 628 ntBASIC3.14□□□□□ -1.91
RXRGP48443 AL591516.1-201ENST00000611326 274 ntBASIC3.14□□□□□ -1.91
RXRGP48443 MIR6134-201ENST00000617606 109 ntBASIC3.14□□□□□ -1.91
RXRGP48443 MIR7157-201ENST00000635801 60 ntBASIC3.14□□□□□ -1.91
RXRGP48443 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RXRGP48443 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.14□□□□□ -1.91
RXRGP48443 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RXRGP48443 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RXRGP48443 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RXRGP48443 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RXRGP48443 Y_RNA.22-201ENST00000362492 102 ntBASIC3.13□□□□□ -1.91
RXRGP48443 RNU6-7-201ENST00000364784 107 ntBASIC3.13□□□□□ -1.91
RXRGP48443 RNU6-8-201ENST00000365467 107 ntBASIC3.13□□□□□ -1.91
RXRGP48443 SET-203ENST00000372688 801 ntTSL 2 BASIC3.13□□□□□ -1.91
RXRGP48443 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 RNU6-748P-201ENST00000384648 107 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AL513475.1-201ENST00000406602 315 ntBASIC3.13□□□□□ -1.91
RXRGP48443 RNA5SP229-201ENST00000410809 99 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.13□□□□□ -1.91
RXRGP48443 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 AL590639.1-201ENST00000456484 337 ntBASIC3.13□□□□□ -1.91
RXRGP48443 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
RXRGP48443 UBE2DNL-203ENST00000474922 222 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AC004924.1-201ENST00000480160 781 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 AC008885.1-201ENST00000514930 301 ntBASIC3.13□□□□□ -1.91
RXRGP48443 RNU6-1220P-201ENST00000517126 108 ntBASIC3.13□□□□□ -1.91
RXRGP48443 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.13□□□□□ -1.91
RXRGP48443 AP001646.1-201ENST00000527936 915 ntBASIC3.13□□□□□ -1.91
RXRGP48443 OR4R1P-201ENST00000529879 463 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 MIR3913-1-201ENST00000577744 102 ntBASIC3.13□□□□□ -1.91
RXRGP48443 MIR3117-201ENST00000584034 78 ntBASIC3.13□□□□□ -1.91
RXRGP48443 MIR4765-201ENST00000585007 77 ntBASIC3.13□□□□□ -1.91
RXRGP48443 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RXRGP48443 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.13□□□□□ -1.91
RXRGP48443 AC005261.5-201ENST00000596280 355 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AL138889.2-201ENST00000603883 242 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AC091152.3-201ENST00000604227 325 ntBASIC3.13□□□□□ -1.91
RXRGP48443 AL121992.2-201ENST00000606262 256 ntBASIC3.13□□□□□ -1.91
RXRGP48443 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.13□□□□□ -1.91
RXRGP48443 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.13□□□□□ -1.91
RXRGP48443 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RXRGP48443 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.12□□□□□ -1.91
RXRGP48443 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RXRGP48443 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RXRGP48443 RNU6-461P-201ENST00000364195 107 ntBASIC3.12□□□□□ -1.91
RXRGP48443 RNU6-61P-201ENST00000365528 109 ntBASIC3.12□□□□□ -1.91
RXRGP48443 RNU6-898P-201ENST00000365627 104 ntBASIC3.12□□□□□ -1.91
RXRGP48443 RNU6-456P-201ENST00000384493 107 ntBASIC3.12□□□□□ -1.91
RXRGP48443 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.12□□□□□ -1.91
RXRGP48443 BX682237.1-201ENST00000415016 335 ntBASIC3.12□□□□□ -1.91
RXRGP48443 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.12□□□□□ -1.91
RXRGP48443 AL445687.1-201ENST00000439946 251 ntBASIC3.12□□□□□ -1.91
RXRGP48443 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.12□□□□□ -1.91
RXRGP48443 RNU6-581P-201ENST00000516214 105 ntBASIC3.12□□□□□ -1.91
RXRGP48443 MTCYBP20-201ENST00000524239 1129 ntBASIC3.12□□□□□ -1.91
RXRGP48443 OR5AL2P-201ENST00000532185 920 ntBASIC3.12□□□□□ -1.91
RXRGP48443 CYCSP39-201ENST00000565821 309 ntBASIC3.12□□□□□ -1.91
RXRGP48443 AC234778.2-201ENST00000566241 354 ntBASIC3.12□□□□□ -1.91
RXRGP48443 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
RXRGP48443 Z84480.1-201ENST00000605131 311 ntBASIC3.12□□□□□ -1.91
RXRGP48443 AC087045.1-201ENST00000605856 382 ntBASIC3.12□□□□□ -1.91
RXRGP48443 AL589743.7-201ENST00000612637 233 ntBASIC3.12□□□□□ -1.91
RXRGP48443 SEPT14P19-203ENST00000633205 211 ntBASIC3.12□□□□□ -1.91
RXRGP48443 CDC27P3-201ENST00000635418 1910 ntBASIC3.12□□□□□ -1.91
RXRGP48443 MTND5P19-201ENST00000424872 1794 ntBASIC3.12□□□□□ -1.91
RXRGP48443 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RXRGP48443 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RXRGP48443 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RXRGP48443 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
RXRGP48443 RNA5SP492-201ENST00000411330 114 ntBASIC3.11□□□□□ -1.91
RXRGP48443 OR51A5P-201ENST00000415429 942 ntBASIC3.11□□□□□ -1.91
RXRGP48443 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.11□□□□□ -1.91
RXRGP48443 AL139281.1-201ENST00000422120 335 ntBASIC3.11□□□□□ -1.91
RXRGP48443 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.11□□□□□ -1.91
RXRGP48443 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms