Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MIR4435-1-201ENST00000582552 80 ntBASIC3.67□□□□□ -1.82
TM4SF4P48230 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.67□□□□□ -1.82
TM4SF4P48230 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.67□□□□□ -1.82
TM4SF4P48230 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.67□□□□□ -1.82
TM4SF4P48230 U6.42-201ENST00000618440 107 ntBASIC3.67□□□□□ -1.82
TM4SF4P48230 AC022149.2-201ENST00000621061 203 ntBASIC3.67□□□□□ -1.82
TM4SF4P48230 MIR4727-201ENST00000622232 55 ntBASIC3.67□□□□□ -1.82
TM4SF4P48230 AC092628.2-201ENST00000622492 339 ntBASIC3.67□□□□□ -1.82
TM4SF4P48230 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.67□□□□□ -1.82
TM4SF4P48230 U6.99-201ENST00000637524 83 ntBASIC3.67□□□□□ -1.82
TM4SF4P48230 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.67□□□□□ -1.82
TM4SF4P48230 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.67□□□□□ -1.82
TM4SF4P48230 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TM4SF4P48230 AC004972.1-201ENST00000623934 2209 ntBASIC3.67□□□□□ -1.82
TM4SF4P48230 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.67□□□□□ -1.82
TM4SF4P48230 CKAP2P1-201ENST00000555477 2049 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 AC006504.1-201ENST00000562493 3666 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM4SF4P48230 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM4SF4P48230 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
TM4SF4P48230 AC017071.1-201ENST00000564407 2204 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 AC062016.1-201ENST00000355719 319 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 SNORA69-201ENST00000383895 132 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 RNA5SP252-201ENST00000391131 119 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.66□□□□□ -1.82
TM4SF4P48230 RN7SKP285-201ENST00000410137 318 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 NDUFS5P4-201ENST00000412983 318 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.66□□□□□ -1.82
TM4SF4P48230 USP9YP18-201ENST00000425912 695 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 HMGB1P9-201ENST00000429856 646 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
TM4SF4P48230 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.66□□□□□ -1.82
TM4SF4P48230 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.66□□□□□ -1.82
TM4SF4P48230 AC069499.1-201ENST00000489433 509 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 MTND4LP22-201ENST00000508209 276 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.66□□□□□ -1.82
TM4SF4P48230 AC068135.2-201ENST00000569293 1028 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.66□□□□□ -1.82
TM4SF4P48230 AC025165.5-201ENST00000602802 578 ntBASIC3.66□□□□□ -1.82
TM4SF4P48230 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
TM4SF4P48230 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM4SF4P48230 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM4SF4P48230 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM4SF4P48230 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TM4SF4P48230 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.65□□□□□ -1.82
TM4SF4P48230 AC110774.1-201ENST00000623567 2018 ntBASIC3.65□□□□□ -1.82
TM4SF4P48230 NACAP2-201ENST00000318548 624 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 SNORA4.3-201ENST00000365564 137 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 Y_RNA.554-201ENST00000384672 102 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 SNORD15B-201ENST00000384714 146 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.65□□□□□ -1.83
TM4SF4P48230 TOMM20P4-201ENST00000427861 435 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AC105272.1-201ENST00000438604 198 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AC073415.1-201ENST00000449240 153 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.65□□□□□ -1.83
TM4SF4P48230 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.65□□□□□ -1.83
TM4SF4P48230 YWHAEP4-201ENST00000505390 198 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.65□□□□□ -1.83
TM4SF4P48230 RNA5SP401-201ENST00000515920 127 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 RN7SKP219-201ENST00000516825 296 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TM4SF4P48230 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.65□□□□□ -1.83
TM4SF4P48230 NACAP3-201ENST00000552100 481 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 HIF1AP1-201ENST00000553642 175 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 AL121576.1-201ENST00000556055 276 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.65□□□□□ -1.83
TM4SF4P48230 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.65□□□□□ -1.83
TM4SF4P48230 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TM4SF4P48230 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.65□□□□□ -1.83
TM4SF4P48230 MIR1321-201ENST00000637766 79 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TM4SF4P48230 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.65□□□□□ -1.83
TM4SF4P48230 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.65□□□□□ -1.83
TM4SF4P48230 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TM4SF4P48230 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
TM4SF4P48230 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.83
TM4SF4P48230 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.65□□□□□ -1.83
TM4SF4P48230 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.64□□□□□ -1.83
TM4SF4P48230 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.64□□□□□ -1.83
TM4SF4P48230 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TM4SF4P48230 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.64□□□□□ -1.83
TM4SF4P48230 RNU6-483P-201ENST00000384088 108 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 Y_RNA.450-201ENST00000384198 113 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 Y_RNA.453-201ENST00000384223 109 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 RNU6-658P-201ENST00000384606 106 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TM4SF4P48230 RNU6-780P-201ENST00000391030 104 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 BTF3P7-201ENST00000407097 488 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 MIR548F1-201ENST00000408667 84 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 RNA5SP229-201ENST00000410809 99 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC126124.2-201ENST00000413542 321 ntBASIC3.64□□□□□ -1.83
TM4SF4P48230 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms