Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MIR625-201ENST00000385047 85 ntBASIC4.34□□□□□ -1.71
CCNFP41002 MIR3065-201ENST00000390137 79 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RNA5SP332-201ENST00000391063 115 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AL022722.2-201ENST00000402519 180 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RNA5SP129-201ENST00000410276 118 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RNU2-33P-201ENST00000410344 192 ntBASIC4.34□□□□□ -1.71
CCNFP41002 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNFP41002 RPL7AP25-201ENST00000423357 805 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AC092423.1-201ENST00000430165 186 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AC087650.1-201ENST00000431445 468 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AC011998.1-201ENST00000433403 117 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AC092573.2-201ENST00000434546 243 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNFP41002 RPL21P2-201ENST00000440049 481 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RPS3AP12-201ENST00000443616 753 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNFP41002 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNFP41002 PCNPP5-201ENST00000452246 481 ntBASIC4.34□□□□□ -1.71
CCNFP41002 U8.21-201ENST00000459536 136 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RPL21P104-201ENST00000464143 478 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RN7SL738P-201ENST00000470264 297 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RPL23AP45-201ENST00000476406 468 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RPS26P15-201ENST00000488067 348 ntBASIC4.34□□□□□ -1.71
CCNFP41002 RN7SL812P-201ENST00000493791 279 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AC104164.2-201ENST00000496953 495 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AK3P2-201ENST00000507976 429 ntBASIC4.34□□□□□ -1.71
CCNFP41002 SNORA31.19-201ENST00000517079 126 ntBASIC4.34□□□□□ -1.71
CCNFP41002 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNFP41002 CPDP1-201ENST00000579660 283 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AL158827.2-201ENST00000602494 330 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AL691447.3-201ENST00000635020 330 ntBASIC4.34□□□□□ -1.71
CCNFP41002 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNFP41002 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNFP41002 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CCNFP41002 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNFP41002 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CCNFP41002 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCNFP41002 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCNFP41002 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCNFP41002 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CCNFP41002 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCNFP41002 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCNFP41002 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNFP41002 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.33□□□□□ -1.72
CCNFP41002 Y_RNA.106-201ENST00000363189 100 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RNU4-42P-201ENST00000364738 142 ntBASIC4.33□□□□□ -1.72
CCNFP41002 Y_RNA.380-201ENST00000365663 111 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RNU6-741P-201ENST00000383889 107 ntBASIC4.33□□□□□ -1.72
CCNFP41002 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCNFP41002 AL138885.1-201ENST00000405921 675 ntBASIC4.33□□□□□ -1.72
CCNFP41002 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNFP41002 AL356387.2-201ENST00000422272 243 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
CCNFP41002 MYL8P-204ENST00000431574 518 ntBASIC4.33□□□□□ -1.72
CCNFP41002 DYNLT3P2-201ENST00000442517 295 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AC009237.8-201ENST00000445492 379 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNFP41002 RPS3AP46-201ENST00000448352 682 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RN7SL585P-201ENST00000470538 280 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RN7SL481P-201ENST00000477764 299 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RNU2-58P-201ENST00000516403 183 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RNU6-572P-201ENST00000516724 80 ntBASIC4.33□□□□□ -1.72
CCNFP41002 RNU7-4P-201ENST00000516961 62 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AC040926.1-201ENST00000530195 238 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.33□□□□□ -1.72
CCNFP41002 MIR5188-201ENST00000583467 113 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AL355297.3-201ENST00000604082 446 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AL138825.1-201ENST00000618587 192 ntBASIC4.33□□□□□ -1.72
CCNFP41002 MIR7703-201ENST00000620784 77 ntBASIC4.33□□□□□ -1.72
CCNFP41002 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.33□□□□□ -1.72
CCNFP41002 AC138627.2-201ENST00000624202 601 ntBASIC4.33□□□□□ -1.72
CCNFP41002 MIR7641-1-201ENST00000627518 61 ntBASIC4.33□□□□□ -1.72
CCNFP41002 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCNFP41002 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNFP41002 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNFP41002 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCNFP41002 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCNFP41002 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 ZNF962P-201ENST00000443465 3140 ntBASIC4.32□□□□□ -1.72
CCNFP41002 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.32□□□□□ -1.72
CCNFP41002 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CCNFP41002 RNU6-713P-201ENST00000384761 107 ntBASIC4.32□□□□□ -1.72
CCNFP41002 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCNFP41002 RNU2-68P-201ENST00000410878 191 ntBASIC4.32□□□□□ -1.72
CCNFP41002 RNA5SP306-201ENST00000411087 107 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNFP41002 RPEP3-201ENST00000425462 676 ntBASIC4.32□□□□□ -1.72
CCNFP41002 USP9YP16-201ENST00000430287 407 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AL627311.1-201ENST00000431514 115 ntBASIC4.32□□□□□ -1.72
CCNFP41002 OSTCP8-201ENST00000445117 448 ntBASIC4.32□□□□□ -1.72
CCNFP41002 MTCO3P8-201ENST00000453691 755 ntBASIC4.32□□□□□ -1.72
CCNFP41002 USP9YP23-201ENST00000455085 407 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms