Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 HPRT1P3-201ENST00000539521 576 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXD13P35453 GLYCAM1-201ENST00000546596 285 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC107016.2-201ENST00000547968 190 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC006199.1-201ENST00000548728 219 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
HOXD13P35453 LINC00933-203ENST00000559812 219 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXD13P35453 AC012213.3-201ENST00000577199 777 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 MIR3913-1-201ENST00000577744 102 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXD13P35453 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXD13P35453 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXD13P35453 AC007938.3-201ENST00000604965 623 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 RN7SKP299-201ENST00000606679 301 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC010678.1-201ENST00000614118 713 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 U6.42-201ENST00000618440 107 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXD13P35453 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXD13P35453 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD13P35453 RN7SKP226-201ENST00000364912 300 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 SNORD116-1-201ENST00000384335 95 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HOXD13P35453 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 UBE2V1P2-201ENST00000397758 440 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD13P35453 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXD13P35453 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC112220.1-201ENST00000434628 355 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXD13P35453 AL161651.1-201ENST00000440882 223 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AL078601.1-201ENST00000444542 271 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXD13P35453 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXD13P35453 AL441985.1-201ENST00000457727 251 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC103975.1-201ENST00000482506 483 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC098591.2-201ENST00000510152 315 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD13P35453 MTCO3P28-201ENST00000513351 515 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC010493.1-201ENST00000513479 292 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 RN7SKP298-201ENST00000515950 94 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC009902.1-201ENST00000519351 183 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXD13P35453 AL121821.2-201ENST00000556081 394 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 MIR4528-201ENST00000577763 90 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXD13P35453 AL022154.1-201ENST00000604698 785 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AL137843.1-201ENST00000605078 385 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AL670379.4-201ENST00000605279 254 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AL121992.2-201ENST00000606262 256 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC005332.10-201ENST00000612725 619 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AL157786.1-207ENST00000627771 695 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 AC090582.1-201ENST00000636321 199 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 LRRC77P-213ENST00000637727 880 ntBASIC3.05□□□□□ -1.92
HOXD13P35453 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD13P35453 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
HOXD13P35453 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HOXD13P35453 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HOXD13P35453 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
HOXD13P35453 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD13P35453 RNU6-61P-201ENST00000365528 109 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 CISD1P1-201ENST00000393907 327 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 MIR887-201ENST00000401258 79 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD13P35453 AL160275.3-201ENST00000423876 471 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD13P35453 SETP8-201ENST00000435341 628 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 MTCO1P19-201ENST00000443487 500 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 MTND2P22-201ENST00000444325 1033 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AL360221.1-201ENST00000445989 335 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD13P35453 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD13P35453 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD13P35453 GZMAP1-201ENST00000503054 631 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD13P35453 RNU6-56P-201ENST00000516986 93 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 RNU6-430P-201ENST00000517078 107 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 SCARNA11.3-201ENST00000517276 130 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 MTCO2P4-201ENST00000517968 247 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD13P35453 MTCYBP20-201ENST00000524239 1129 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AP001646.1-201ENST00000527936 915 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD13P35453 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD13P35453 AL391840.1-201ENST00000571144 367 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 AC103810.1-201ENST00000579873 453 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD13P35453 AC107871.2-201ENST00000612894 502 ntBASIC3.04□□□□□ -1.92
HOXD13P35453 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD13P35453 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD13P35453 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD13P35453 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD13P35453 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD13P35453 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HOXD13P35453 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD13P35453 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD13P35453 SNORA68.1-201ENST00000364537 132 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms