Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC124947.2-202ENST00000552735 133 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 AC091489.2-201ENST00000566263 604 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 AC109446.2-201ENST00000567872 497 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 MIR3915-201ENST00000578518 97 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.74□□□□□ -2.13
COL8A2P25067 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL8A2P25067 AL355877.2-201ENST00000603670 358 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 AC092354.1-201ENST00000606057 376 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.15-201ENST00000611544 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.16-201ENST00000613119 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.12-201ENST00000613778 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.20-201ENST00000613956 192 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.9-201ENST00000615427 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.11-201ENST00000616345 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.2-201ENST00000616535 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.3-201ENST00000617785 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.19-201ENST00000618602 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 RNU2-1-201ENST00000618664 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.6-201ENST00000619225 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.5-201ENST00000619465 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 U2.10-201ENST00000620268 191 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 AC091931.1-201ENST00000623488 728 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.74□□□□□ -2.13
COL8A2P25067 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.74□□□□□ -2.13
COL8A2P25067 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL8A2P25067 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL8A2P25067 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL8A2P25067 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL8A2P25067 MTND5P33-201ENST00000571250 1450 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 DDX10P1-201ENST00000448545 1933 ntBASIC1.74□□□□□ -2.13
COL8A2P25067 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL8A2P25067 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL8A2P25067 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL8A2P25067 RNU5E-8P-201ENST00000363502 116 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 RNU6-432P-201ENST00000384196 109 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 SNORA51.11-201ENST00000384442 131 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 RNU6-809P-201ENST00000384461 107 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 RNU6-754P-201ENST00000391166 107 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL8A2P25067 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.73□□□□□ -2.13
COL8A2P25067 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 GDI2P2-201ENST00000445131 608 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 BMI1P1-201ENST00000445879 941 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 TPT1P14-201ENST00000448018 505 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 DPPA3P1-201ENST00000448050 469 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 KATNBL1P6-201ENST00000453433 915 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 MTCO1P42-201ENST00000457379 726 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.73□□□□□ -2.13
COL8A2P25067 RNU7-23P-201ENST00000459465 62 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC087588.1-201ENST00000462203 316 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.73□□□□□ -2.13
COL8A2P25067 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 SCARNA15.2-201ENST00000516409 127 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 MTND4LP18-201ENST00000526864 291 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AP000907.2-201ENST00000530827 353 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.73□□□□□ -2.13
COL8A2P25067 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.73□□□□□ -2.13
COL8A2P25067 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.73□□□□□ -2.13
COL8A2P25067 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.73□□□□□ -2.13
COL8A2P25067 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 AC068790.3-201ENST00000602988 553 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC121247.2-201ENST00000604776 136 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL8A2P25067 AC004908.2-201ENST00000609090 574 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC012360.2-201ENST00000609349 391 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 OR10AB1P-201ENST00000609613 938 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC009318.2-201ENST00000610917 651 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC013562.2-201ENST00000611632 603 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.73□□□□□ -2.13
COL8A2P25067 AC112204.3-201ENST00000623822 332 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 AC019226.1-201ENST00000625666 515 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
COL8A2P25067 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL8A2P25067 AC007785.2-201ENST00000598627 1916 ntBASIC1.73□□□□□ -2.13
COL8A2P25067 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL8A2P25067 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
COL8A2P25067 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.72□□□□□ -2.13
COL8A2P25067 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL8A2P25067 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL8A2P25067 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.72□□□□□ -2.13
COL8A2P25067 RNU6-223P-201ENST00000362830 107 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL8A2P25067 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 AL139156.1-201ENST00000412785 841 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.72□□□□□ -2.13
COL8A2P25067 AC008850.1-201ENST00000427546 362 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 TOMM20P4-201ENST00000427861 435 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 GTF2IP20-201ENST00000431663 360 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 RPL22P17-201ENST00000438729 315 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 UBE2D3P4-201ENST00000441973 436 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.72□□□□□ -2.13
COL8A2P25067 EPS15P1-201ENST00000448836 336 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL8A2P25067 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.72□□□□□ -2.13
COL8A2P25067 MTND3P7-201ENST00000474435 343 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms