Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL11A2P13942 MTND5P19-201ENST00000424872 1794 ntBASIC3.79□□□□□ -1.8
COL11A2P13942 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.79□□□□□ -1.8
COL11A2P13942 RNU6-1078P-201ENST00000364522 103 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 RNU6-61P-201ENST00000365528 109 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 MIR548F5-201ENST00000408421 86 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 RNU6-847P-201ENST00000411115 108 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.78□□□□□ -1.8
COL11A2P13942 AC114491.1-201ENST00000416095 246 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 MED13P1-201ENST00000428342 171 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.78□□□□□ -1.8
COL11A2P13942 AC133473.1-201ENST00000455173 299 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A2P13942 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A2P13942 COX7A2P2-201ENST00000505291 250 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A2P13942 RNU6-1038P-201ENST00000516516 104 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 RNA5SP454-201ENST00000517231 127 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AP003122.3-201ENST00000526316 255 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A2P13942 OR4P1P-201ENST00000530808 1136 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AL118558.2-201ENST00000556294 238 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A2P13942 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A2P13942 AC022893.3-201ENST00000607665 437 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AP001486.3-201ENST00000615334 372 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC103858.2-201ENST00000621471 543 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 PLCE1P1-201ENST00000622094 305 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 AC005183.1-201ENST00000603687 1979 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COL11A2P13942 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A2P13942 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.78□□□□□ -1.8
COL11A2P13942 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.78□□□□□ -1.8
COL11A2P13942 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 Y_RNA.158-201ENST00000363651 101 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 RNU6-1032P-201ENST00000384100 107 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC009302.1-201ENST00000417147 390 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC114482.1-201ENST00000418010 247 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC009965.2-201ENST00000425328 970 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AL731563.1-201ENST00000442202 214 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A2P13942 HMGN2P7-201ENST00000456186 273 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A2P13942 SNORD97-201ENST00000459187 142 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC087879.1-201ENST00000474343 374 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 RNU1-143P-201ENST00000516296 146 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 RN7SKP295-201ENST00000517264 153 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A2P13942 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 CYCSP39-201ENST00000565821 309 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC006270.2-201ENST00000578523 652 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.78□□□□□ -1.8
COL11A2P13942 AC010680.4-201ENST00000605334 543 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.78□□□□□ -1.8
COL11A2P13942 AC011373.1-201ENST00000607270 237 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AC004832.5-201ENST00000608677 401 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.78□□□□□ -1.8
COL11A2P13942 U1.23-201ENST00000610293 146 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 AL590099.1-201ENST00000615276 138 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 RNU1-68P-201ENST00000615382 146 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 uc_338.34-201ENST00000617467 174 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 U1.39-201ENST00000621562 146 ntBASIC3.78□□□□□ -1.8
COL11A2P13942 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.78□□□□□ -1.8
COL11A2P13942 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL11A2P13942 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A2P13942 AC000403.1-201ENST00000613696 3585 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A2P13942 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A2P13942 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COL11A2P13942 MIR22-201ENST00000362190 85 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL11A2P13942 AC117470.1-201ENST00000381974 330 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 SSXP10-201ENST00000402595 565 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AC018865.2-201ENST00000423631 129 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A2P13942 snoU13.7-201ENST00000459220 104 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AC106872.2-201ENST00000494303 480 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 RPS27P27-201ENST00000498779 255 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
COL11A2P13942 RNU6-123P-201ENST00000516163 102 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 HMGB1P41-201ENST00000520234 440 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AC103783.1-201ENST00000520506 373 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.77□□□□□ -1.81
COL11A2P13942 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.77□□□□□ -1.81
COL11A2P13942 IMMP1LP2-201ENST00000552954 492 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.77□□□□□ -1.81
COL11A2P13942 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A2P13942 AC024619.4-201ENST00000580924 316 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.77□□□□□ -1.81
COL11A2P13942 AC024153.1-201ENST00000603103 365 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AC023813.4-201ENST00000607580 580 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.77□□□□□ -1.81
COL11A2P13942 AC006157.1-201ENST00000611750 366 ntBASIC3.77□□□□□ -1.81
COL11A2P13942 AC092608.2-201ENST00000624427 218 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms