Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RNU6-259P-201ENST00000383999 107 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 Y_RNA.608-201ENST00000410647 95 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RN7SKP140-201ENST00000411196 284 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RNU6-195P-201ENST00000411352 109 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC078974.1-201ENST00000411597 223 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RPS3AP3-201ENST00000411933 242 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC4P09017 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC4P09017 AL135786.1-201ENST00000415892 214 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC4P09017 MTCO3P30-201ENST00000426425 670 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 ARPC3P1-201ENST00000437218 533 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 FAM103A2P-201ENST00000444122 354 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC4P09017 snoU13.28-201ENST00000459235 104 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 LARP1BP2-201ENST00000486594 519 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXC4P09017 SNORA31.11-201ENST00000516528 139 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RNU6-1282P-201ENST00000516735 96 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 MTND4LP26-201ENST00000518144 282 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC4P09017 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC4P09017 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.36□□□□□ -2.03
HOXC4P09017 AP003181.2-201ENST00000528941 181 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC022878.1-201ENST00000530684 149 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC4P09017 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC4P09017 HMGN1P30-201ENST00000589286 268 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC4P09017 AP003465.2-201ENST00000602571 373 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC090578.1-201ENST00000604955 591 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AF250324.2-201ENST00000608299 610 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC138749.5-201ENST00000611461 208 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC091834.1-201ENST00000614543 472 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC090132.2-201ENST00000615881 347 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC116165.2-201ENST00000616705 206 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 AC009159.1-201ENST00000618386 642 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 MTCO1P9-201ENST00000505577 1534 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC4P09017 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC4P09017 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC4P09017 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC4P09017 RNU6-28P-201ENST00000362378 107 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 Y_RNA.46-201ENST00000362695 102 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 RNY4P24-201ENST00000362735 96 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 RNU6-853P-201ENST00000364306 107 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 RNU6-1035P-201ENST00000384477 107 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 CCNG1P1-201ENST00000406783 885 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 SPA17P1-201ENST00000416656 452 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AL513477.1-202ENST00000417061 214 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AL356320.1-201ENST00000429616 163 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 DNAJC19P4-201ENST00000440115 345 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 MTND6P13-201ENST00000443510 523 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC4P09017 GAPDHP17-201ENST00000449858 1001 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC4P09017 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC4P09017 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC4P09017 AC008413.1-201ENST00000511864 177 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC008549.1-201ENST00000512900 643 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC4P09017 RN7SKP298-201ENST00000515950 94 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 SCARNA15.2-201ENST00000516409 127 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 RNU2-46P-201ENST00000517038 113 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
HOXC4P09017 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC4P09017 AC137800.2-201ENST00000574375 120 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC009163.5-201ENST00000575421 637 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AP001094.1-201ENST00000579805 193 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 MTATP6P3-201ENST00000581686 676 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXC4P09017 AC060766.3-201ENST00000591442 263 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC011451.2-201ENST00000604303 598 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AL161729.4-201ENST00000604650 476 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AL136363.1-201ENST00000605349 337 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC092794.1-201ENST00000612734 582 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC073308.1-201ENST00000623696 305 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AL160394.1-201ENST00000624765 724 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC099654.12-201ENST00000639868 649 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 AC026241.1-201ENST00000517873 2142 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 ZNF658B-202ENST00000615961 3375 ntBASIC2.35□□□□□ -2.03
HOXC4P09017 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC4P09017 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HOXC4P09017 AC022336.2-201ENST00000568966 2538 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC4P09017 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 U8.3-201ENST00000363321 132 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 RNY4P34-201ENST00000364779 95 ntBASIC2.34□□□□□ -2.03
HOXC4P09017 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC4P09017 Y_RNA.554-201ENST00000384672 102 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms