Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC010655.3-201ENST00000478818 450 ntBASIC5.04□□□□□ -1.6
NEFMP07197 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.04□□□□□ -1.6
NEFMP07197 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.04□□□□□ -1.6
NEFMP07197 AC026782.1-201ENST00000512952 449 ntBASIC5.04□□□□□ -1.6
NEFMP07197 RNU6-1069P-201ENST00000516612 133 ntBASIC5.04□□□□□ -1.6
NEFMP07197 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.04□□□□□ -1.6
NEFMP07197 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEFMP07197 AP004242.1-201ENST00000533701 349 ntBASIC5.04□□□□□ -1.6
NEFMP07197 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.04□□□□□ -1.6
NEFMP07197 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.04□□□□□ -1.6
NEFMP07197 AC034105.4-201ENST00000568304 277 ntBASIC5.04□□□□□ -1.6
NEFMP07197 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.04□□□□□ -1.6
NEFMP07197 SNHG22-203ENST00000617833 660 ntBASIC5.04□□□□□ -1.6
NEFMP07197 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEFMP07197 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.04□□□□□ -1.6
NEFMP07197 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEFMP07197 Y_RNA.153-201ENST00000363615 91 ntBASIC5.03□□□□□ -1.6
NEFMP07197 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEFMP07197 Y_RNA.428-201ENST00000384078 102 ntBASIC5.03□□□□□ -1.6
NEFMP07197 SNORD70.1-201ENST00000391007 85 ntBASIC5.03□□□□□ -1.6
NEFMP07197 Y_RNA.594-201ENST00000410373 140 ntBASIC5.03□□□□□ -1.6
NEFMP07197 RNU2-37P-201ENST00000410695 177 ntBASIC5.03□□□□□ -1.6
NEFMP07197 RPS15AP40-201ENST00000419621 391 ntBASIC5.03□□□□□ -1.6
NEFMP07197 AC093106.2-201ENST00000428212 385 ntBASIC5.03□□□□□ -1.6
NEFMP07197 SNRPGP3-201ENST00000469405 227 ntBASIC5.03□□□□□ -1.6
NEFMP07197 AC026801.1-201ENST00000497178 464 ntBASIC5.03□□□□□ -1.6
NEFMP07197 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.03□□□□□ -1.6
NEFMP07197 RBBP4P6-201ENST00000508098 202 ntBASIC5.03□□□□□ -1.6
NEFMP07197 AC005798.1-201ENST00000513715 387 ntBASIC5.03□□□□□ -1.6
NEFMP07197 RNU6-470P-201ENST00000515954 104 ntBASIC5.03□□□□□ -1.6
NEFMP07197 RN7SKP234-201ENST00000517173 224 ntBASIC5.03□□□□□ -1.6
NEFMP07197 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.03□□□□□ -1.6
NEFMP07197 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.03□□□□□ -1.6
NEFMP07197 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.03□□□□□ -1.6
NEFMP07197 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.03□□□□□ -1.6
NEFMP07197 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.03□□□□□ -1.6
NEFMP07197 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.03□□□□□ -1.6
NEFMP07197 AC005592.1-201ENST00000566527 1640 ntBASIC5.03□□□□□ -1.6
NEFMP07197 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEFMP07197 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEFMP07197 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
NEFMP07197 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEFMP07197 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEFMP07197 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEFMP07197 RNU6-99P-201ENST00000364721 107 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RNU6-946P-201ENST00000383878 107 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RNU6-434P-201ENST00000384376 107 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RNU6-393P-201ENST00000384475 107 ntBASIC5.02□□□□□ -1.61
NEFMP07197 HMGN2P8-201ENST00000391458 268 ntBASIC5.02□□□□□ -1.61
NEFMP07197 HLFP1-201ENST00000402375 499 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RNU4-65P-201ENST00000410473 140 ntBASIC5.02□□□□□ -1.61
NEFMP07197 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEFMP07197 AC236972.1-201ENST00000433225 199 ntBASIC5.02□□□□□ -1.61
NEFMP07197 AC010655.1-201ENST00000449336 292 ntBASIC5.02□□□□□ -1.61
NEFMP07197 snoU109.4-201ENST00000458953 143 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RN7SL542P-201ENST00000467147 294 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RPL7P47-201ENST00000497299 556 ntBASIC5.02□□□□□ -1.61
NEFMP07197 Y_RNA.670-201ENST00000516255 105 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RNU6-307P-201ENST00000516743 106 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RNU6-699P-201ENST00000517081 110 ntBASIC5.02□□□□□ -1.61
NEFMP07197 SNORD116.3-201ENST00000517176 78 ntBASIC5.02□□□□□ -1.61
NEFMP07197 IGKV2-23-201ENST00000518729 323 ntBASIC5.02□□□□□ -1.61
NEFMP07197 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.02□□□□□ -1.61
NEFMP07197 AC074050.1-201ENST00000563247 211 ntBASIC5.02□□□□□ -1.61
NEFMP07197 AL355812.1-201ENST00000603215 216 ntBASIC5.02□□□□□ -1.61
NEFMP07197 RNA5SP108-201ENST00000605921 117 ntBASIC5.02□□□□□ -1.61
NEFMP07197 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.02□□□□□ -1.61
NEFMP07197 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.02□□□□□ -1.61
NEFMP07197 U7.8-201ENST00000619968 63 ntBASIC5.02□□□□□ -1.61
NEFMP07197 AC006065.5-201ENST00000623427 349 ntBASIC5.02□□□□□ -1.61
NEFMP07197 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.02□□□□□ -1.61
NEFMP07197 AL732372.2-225ENST00000642124 456 ntBASIC5.02□□□□□ -1.61
NEFMP07197 MTCO1P24-201ENST00000515438 1558 ntBASIC5.02□□□□□ -1.61
NEFMP07197 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEFMP07197 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEFMP07197 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEFMP07197 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.01□□□□□ -1.61
NEFMP07197 Y_RNA.404-201ENST00000383978 102 ntBASIC5.01□□□□□ -1.61
NEFMP07197 Y_RNA.496-201ENST00000384444 101 ntBASIC5.01□□□□□ -1.61
NEFMP07197 SNORA16.2-201ENST00000390991 127 ntBASIC5.01□□□□□ -1.61
NEFMP07197 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.01□□□□□ -1.61
NEFMP07197 AL445584.1-201ENST00000431451 330 ntBASIC5.01□□□□□ -1.61
NEFMP07197 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NEFMP07197 NOTCH2P1-201ENST00000443481 624 ntBASIC5.01□□□□□ -1.61
NEFMP07197 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.01□□□□□ -1.61
NEFMP07197 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.01□□□□□ -1.61
NEFMP07197 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.01□□□□□ -1.61
NEFMP07197 AC023141.12-201ENST00000512399 199 ntBASIC5.01□□□□□ -1.61
NEFMP07197 TBCAP3-201ENST00000512475 312 ntBASIC5.01□□□□□ -1.61
NEFMP07197 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.01□□□□□ -1.61
NEFMP07197 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.01□□□□□ -1.61
NEFMP07197 MIR5187-201ENST00000583479 76 ntBASIC5.01□□□□□ -1.61
NEFMP07197 AL670379.4-201ENST00000605279 254 ntBASIC5.01□□□□□ -1.61
NEFMP07197 AL589994.2-201ENST00000621124 579 ntBASIC5.01□□□□□ -1.61
NEFMP07197 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEFMP07197 CDC27P3-201ENST00000635418 1910 ntBASIC5.01□□□□□ -1.61
NEFMP07197 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEFMP07197 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
NEFMP07197 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5□□□□□ -1.61
NEFMP07197 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms