Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RN7SL176P-201ENST00000580352 264 ntBASIC5.38□□□□□ -1.55
ALDH1A1P00352 AC005046.1-201ENST00000608515 625 ntBASIC5.38□□□□□ -1.55
ALDH1A1P00352 AL008718.3-201ENST00000610217 321 ntBASIC5.38□□□□□ -1.55
ALDH1A1P00352 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.38□□□□□ -1.55
ALDH1A1P00352 AC008873.1-201ENST00000625051 138 ntBASIC5.38□□□□□ -1.55
ALDH1A1P00352 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ALDH1A1P00352 AC010266.2-201ENST00000564741 3255 ntBASIC5.38□□□□□ -1.55
ALDH1A1P00352 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 Z95331.1-201ENST00000623075 23112 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 SPRR2C-201ENST00000290702 219 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 RNU4-9P-201ENST00000364951 139 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 SNORA70.4-201ENST00000365509 134 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 SNORA11.1-201ENST00000408133 129 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 BX276092.6-201ENST00000430476 250 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 AL512844.2-201ENST00000433990 593 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 RPL23AP93-201ENST00000440847 484 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 AL358232.1-201ENST00000448030 501 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 BX276092.8-201ENST00000455722 250 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 CYCSP26-201ENST00000534107 320 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 AL157871.3-201ENST00000557231 293 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 AC055872.1-201ENST00000570978 278 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 AC010928.2-201ENST00000588017 287 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 BPIFA4P-203ENST00000603168 689 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 Y_RNA.802-201ENST00000614892 130 ntBASIC5.37□□□□□ -1.55
ALDH1A1P00352 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.37□□□□□ -1.55
ALDH1A1P00352 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ALDH1A1P00352 STX3-208ENST00000641815 3236 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 AC021146.4-201ENST00000309229 279 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNU6-1155P-201ENST00000363554 107 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNU6-879P-201ENST00000364328 108 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 Y_RNA.238-201ENST00000364441 102 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNA5SP267-201ENST00000364893 126 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNU6-395P-201ENST00000365662 106 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNU6-17P-201ENST00000384245 107 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNU6-18P-201ENST00000384527 107 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNA5SP213-201ENST00000391031 106 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RNY4P18-201ENST00000391107 89 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 SNORD12B-201ENST00000410433 91 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 AP000907.1-201ENST00000428428 510 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 AC117440.1-201ENST00000474107 571 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 RN7SL132P-201ENST00000478131 296 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 ENPP7P11-201ENST00000505915 627 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 AC005476.1-201ENST00000554427 397 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 MIR4679-2-201ENST00000578358 77 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 AL161629.2-201ENST00000615347 275 ntBASIC5.36□□□□□ -1.55
ALDH1A1P00352 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.36□□□□□ -1.55
ALDH1A1P00352 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ALDH1A1P00352 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
ALDH1A1P00352 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ALDH1A1P00352 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.35□□□□□ -1.55
ALDH1A1P00352 THAP12P5-201ENST00000405864 2275 ntBASIC5.35□□□□□ -1.55
ALDH1A1P00352 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ALDH1A1P00352 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ALDH1A1P00352 SNORA70.6-201ENST00000383934 134 ntBASIC5.35□□□□□ -1.55
ALDH1A1P00352 RNU6-1056P-201ENST00000383996 107 ntBASIC5.35□□□□□ -1.55
ALDH1A1P00352 MT-TC-201ENST00000387405 66 ntBASIC5.35□□□□□ -1.55
ALDH1A1P00352 U3.32-201ENST00000408116 212 ntBASIC5.35□□□□□ -1.55
ALDH1A1P00352 AL390729.2-201ENST00000416137 156 ntBASIC5.35□□□□□ -1.55
ALDH1A1P00352 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.35□□□□□ -1.55
ALDH1A1P00352 SSXP9-201ENST00000417503 292 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms