Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL137161.1-201ENST00000532231 390 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 MIR5692A1-201ENST00000580523 69 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 MIR4424-201ENST00000585257 86 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-2O95096 U1.23-201ENST00000610293 146 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 AC019176.2-201ENST00000611579 315 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 RNU1-68P-201ENST00000615382 146 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 U1.39-201ENST00000621562 146 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 AC010338.1-201ENST00000621823 717 ntBASIC2.99□□□□□ -1.93
NKX2-2O95096 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.99□□□□□ -1.93
NKX2-2O95096 FER-210ENST00000628534 558 ntTSL 5 BASIC2.99□□□□□ -1.93
NKX2-2O95096 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-2O95096 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-2O95096 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-2O95096 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-2O95096 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 SNORA71.3-201ENST00000362582 128 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 SNORD56.3-201ENST00000363507 71 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 RNU6-715P-201ENST00000365204 103 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 RNU4-12P-201ENST00000365233 139 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 RNU6-166P-201ENST00000384371 107 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 RNU6-658P-201ENST00000384606 106 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NKX2-2O95096 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 RNU6-193P-201ENST00000410977 107 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 USP9YP27-201ENST00000418455 438 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 MTCO1P20-201ENST00000425366 358 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AL078601.1-201ENST00000444542 271 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 RPL23AP14-201ENST00000468281 468 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 AC104472.2-201ENST00000469035 601 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 RPL23AP11-201ENST00000475260 469 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 MTAPP1-201ENST00000489154 819 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.98□□□□□ -1.93
NKX2-2O95096 RNA5SP217-201ENST00000515959 91 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.98□□□□□ -1.93
NKX2-2O95096 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AL138976.2-201ENST00000563989 694 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 MIR4429-201ENST00000580105 73 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AC092794.1-201ENST00000612734 582 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 MIR6075-201ENST00000620782 95 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 YWHAEP7-203ENST00000622054 312 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AC091903.1-201ENST00000624322 454 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.98□□□□□ -1.93
NKX2-2O95096 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.98□□□□□ -1.93
NKX2-2O95096 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NKX2-2O95096 AC110774.1-201ENST00000623567 2018 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 MTND4P14-201ENST00000435799 1354 ntBASIC2.98□□□□□ -1.93
NKX2-2O95096 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX2-2O95096 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-2O95096 RNU6-1090P-201ENST00000364065 94 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 RNU6-805P-201ENST00000365643 106 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 MIR7-3-201ENST00000384898 110 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 RPL21P90-201ENST00000415692 466 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AL353621.1-201ENST00000418219 243 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX2-2O95096 RPL23AP22-201ENST00000437556 453 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-2O95096 AC091153.1-201ENST00000466297 402 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AL121769.1-201ENST00000469473 401 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AC128713.1-201ENST00000471495 306 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-2O95096 RNU6-1178P-201ENST00000516674 107 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 IGHV3-76-201ENST00000522465 295 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.97□□□□□ -1.93
NKX2-2O95096 SUB1P1-201ENST00000524415 382 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX2-2O95096 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-2O95096 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-2O95096 TRAV37-201ENST00000553906 342 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 MTCO3P23-201ENST00000561363 289 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 CYCSP39-201ENST00000565821 309 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 MIR4782-201ENST00000577987 79 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.97□□□□□ -1.93
NKX2-2O95096 AC024220.1-201ENST00000603675 484 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 uc_338.25-201ENST00000613756 156 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-2O95096 U6.42-201ENST00000618440 107 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NKX2-2O95096 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX2-2O95096 U6.99-201ENST00000637524 83 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 AL021368.2-201ENST00000606125 5352 ntBASIC2.97□□□□□ -1.93
NKX2-2O95096 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NKX2-2O95096 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms