Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ACTN4O43707 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.52□□□□□ -1.53
ACTN4O43707 AC133552.1-201ENST00000569988 4007 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ACTN4O43707 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.52□□□□□ -1.53
ACTN4O43707 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ACTN4O43707 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ACTN4O43707 UBBP2-201ENST00000376781 231 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 Y_RNA.542-201ENST00000384641 111 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 RNY4P18-201ENST00000391107 89 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.52□□□□□ -1.53
ACTN4O43707 RPL36AP10-201ENST00000421785 322 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 EIF4HP2-201ENST00000424380 563 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.52□□□□□ -1.53
ACTN4O43707 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.52□□□□□ -1.53
ACTN4O43707 GEMIN8P3-201ENST00000445417 720 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.52□□□□□ -1.53
ACTN4O43707 RPS26P39-201ENST00000469206 341 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 RN7SL591P-201ENST00000496150 292 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.52□□□□□ -1.53
ACTN4O43707 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.52□□□□□ -1.53
ACTN4O43707 MIR4431-201ENST00000579990 94 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 MIR3145-201ENST00000580727 82 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 MIR3936-201ENST00000584304 110 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AC087783.2-201ENST00000605070 562 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 MIR6862-1-201ENST00000613016 70 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 MIR6862-2-201ENST00000614755 70 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AC131238.1-201ENST00000617135 328 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 MIR6729-201ENST00000618194 65 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AL022401.1-201ENST00000619498 108 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AL353748.2-201ENST00000622148 471 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AC241585.2-209ENST00000638217 143 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 AC099654.2-201ENST00000433031 1980 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 DHX9P1-201ENST00000436565 3076 ntBASIC5.52□□□□□ -1.53
ACTN4O43707 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.52□□□□□ -1.53
ACTN4O43707 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.52□□□□□ -1.53
ACTN4O43707 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
ACTN4O43707 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
ACTN4O43707 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.52□□□□□ -1.53
ACTN4O43707 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.52□□□□□ -1.53
ACTN4O43707 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
ACTN4O43707 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ACTN4O43707 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ACTN4O43707 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ACTN4O43707 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ACTN4O43707 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.51□□□□□ -1.53
ACTN4O43707 RNU6-199P-201ENST00000362954 107 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 RNU6-105P-201ENST00000363909 104 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 RNU6-899P-201ENST00000363947 107 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 RNA5SP428-201ENST00000365129 132 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 MIR514A1-201ENST00000385133 98 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 RNA5SP44-201ENST00000410446 133 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 AC091390.3-201ENST00000426478 338 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 RPS26P47-201ENST00000427219 348 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.51□□□□□ -1.53
ACTN4O43707 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
ACTN4O43707 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.51□□□□□ -1.53
ACTN4O43707 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ACTN4O43707 MIR1269B-201ENST00000580405 75 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 AC006254.2-201ENST00000603259 279 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 MIR6768-201ENST00000610734 72 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 Y_RNA.802-201ENST00000614892 130 ntBASIC5.51□□□□□ -1.53
ACTN4O43707 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.51□□□□□ -1.53
ACTN4O43707 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ACTN4O43707 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.51□□□□□ -1.53
ACTN4O43707 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ACTN4O43707 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
ACTN4O43707 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ACTN4O43707 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ACTN4O43707 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ACTN4O43707 SALL4P2-201ENST00000423288 2910 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ACTN4O43707 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ACTN4O43707 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ACTN4O43707 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
ACTN4O43707 RPL23P2-201ENST00000320371 421 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 RNU6-527P-201ENST00000363425 104 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 Y_RNA.245-201ENST00000364493 95 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 RNA5SP455-201ENST00000365190 119 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 Y_RNA.420-201ENST00000384043 110 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 RNU1-106P-201ENST00000384382 164 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ACTN4O43707 RNU6-159P-201ENST00000391080 106 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.5□□□□□ -1.53
ACTN4O43707 AL590399.6-201ENST00000446396 307 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 EEF1B2P7-201ENST00000451177 676 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.5□□□□□ -1.53
ACTN4O43707 AC092798.1-201ENST00000458542 409 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 RN7SL97P-201ENST00000486780 299 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 AC107027.2-201ENST00000512197 115 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 AL671862.1-201ENST00000515851 349 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 RNU6-572P-201ENST00000516724 80 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 MIR4716-201ENST00000579628 84 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 MIR4512-201ENST00000583257 77 ntBASIC5.5□□□□□ -1.53
ACTN4O43707 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.5□□□□□ -1.53
ACTN4O43707 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.5□□□□□ -1.53
ACTN4O43707 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ACTN4O43707 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ACTN4O43707 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms