Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORD114-21-201ENST00000606412 72 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 AC011939.3-201ENST00000613686 466 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 AC027335.2-201ENST00000624030 375 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR6866-201ENST00000638146 69 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU6-891P-201ENST00000384280 111 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR1267-201ENST00000408723 78 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 PGBD4P5-201ENST00000445958 426 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 RPL30P12-201ENST00000474666 353 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC087343.1-201ENST00000477341 475 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC093852.1-201ENST00000503587 266 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC069306.1-201ENST00000507006 843 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 ACA64.5-201ENST00000516207 127 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 RNVU1-2-201ENST00000516326 135 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 SCARNA16.2-201ENST00000516520 172 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 NRON-201ENST00000517270 370 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 DNAJC19P9-201ENST00000555084 351 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 PSMA3P-201ENST00000555485 635 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 SULT1C2P1-202ENST00000562418 459 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC00557-201ENST00000563184 1279 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC012213.3-201ENST00000577199 777 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR3660-201ENST00000584845 100 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR4443-201ENST00000585052 53 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AL390838.2-201ENST00000602394 274 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 DUXAP11-201ENST00000603858 526 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AL022345.1-201ENST00000607292 135 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC064859.1-201ENST00000624741 174 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AC017037.3-201ENST00000625016 472 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 IGHVIII-44-202ENST00000636235 289 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 AL590396.2-201ENST00000636511 1041 ntBASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CHKB-CPT1BH3BT56 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 DDX43P2-201ENST00000604753 1354 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU6-564P-201ENST00000410983 104 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 MOB1AP2-201ENST00000446060 614 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 BX322784.1-201ENST00000455793 1077 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC087477.1-201ENST00000465747 340 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC145146.1-201ENST00000496370 254 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC103851.1-201ENST00000506833 274 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC108078.1-201ENST00000508073 725 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC017037.2-201ENST00000513850 890 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC024224.1-201ENST00000538284 609 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AL731537.2-201ENST00000561565 951 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 CYP3A52P-201ENST00000563326 91 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 ADAM3B-201ENST00000569937 840 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC005951.2-201ENST00000576282 495 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR3162-201ENST00000581818 82 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR4435-1-201ENST00000582552 80 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AL645939.4-201ENST00000604495 135 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AL033523.1-201ENST00000605153 153 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC008945.2-201ENST00000606056 604 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 AC239868.4-201ENST00000608318 671 ntBASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CHKB-CPT1BH3BT56 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 RNA5SP190-201ENST00000365222 118 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU6-611P-201ENST00000384276 104 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 CCNG1P1-201ENST00000406783 885 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 RN7SKP61-201ENST00000410642 295 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 RNU2-64P-201ENST00000411315 191 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 NCOR1P3-201ENST00000420479 303 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 MTND5P15-201ENST00000434246 349 ntBASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CHKB-CPT1BH3BT56 AL353691.1-201ENST00000451332 387 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms