Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 MIR517A-201ENST00000385001 87 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AL590704.1-201ENST00000402856 794 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AL160275.3-201ENST00000423876 471 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 RPS29P17-201ENST00000430795 166 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC011998.1-201ENST00000433403 117 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 SUMO1P3-201ENST00000439961 304 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 DYNLT3P2-201ENST00000442517 295 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC073910.1-201ENST00000445047 438 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 RPL23AP24-201ENST00000458203 385 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 RPS29P19-201ENST00000479709 171 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC011005.2-201ENST00000487324 359 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AL592156.1-201ENST00000508758 304 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AL139395.1-201ENST00000603662 160 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 FAM27D1-201ENST00000612308 341 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 MIR7702-201ENST00000621931 59 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AC138627.2-201ENST00000624202 601 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 ZNF962P-201ENST00000443465 3140 ntBASIC3.33□□□□□ -1.88
CGB1A6NKQ9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CGB1A6NKQ9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 MIR192-201ENST00000384915 110 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RNU6-817P-201ENST00000391083 104 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 PPIAP31-201ENST00000405422 495 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 MIR548I3-201ENST00000408378 149 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 MIR548I1-201ENST00000408810 149 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RNA5SP306-201ENST00000411087 107 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RN7SKP53-201ENST00000411337 315 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RPL23AP26-201ENST00000412728 464 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 PGBD4P6-201ENST00000421501 610 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RPS15AP10-201ENST00000432472 382 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AL772161.1-201ENST00000439130 476 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RPS29P33-201ENST00000456717 146 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RNU7-187P-201ENST00000458985 68 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AC109327.1-201ENST00000471666 403 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 RPL17P19-201ENST00000489069 552 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 SNORA70.14-201ENST00000516205 110 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 SNORA40.14-201ENST00000516543 86 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 Y_RNA.715-201ENST00000517082 110 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 CDH12P4-201ENST00000517835 295 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 CDH12P3-201ENST00000517935 295 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 CDH12P1-201ENST00000518435 295 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AC023157.2-201ENST00000540596 141 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 MIR5692A1-201ENST00000580523 69 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AC004805.2-201ENST00000605382 482 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AC002044.1-201ENST00000606707 158 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AL365434.2-201ENST00000607979 234 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 AP000346.3-201ENST00000622821 210 ntBASIC3.32□□□□□ -1.88
CGB1A6NKQ9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CGB1A6NKQ9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.31□□□□□ -1.88
CGB1A6NKQ9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.31□□□□□ -1.88
CGB1A6NKQ9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CGB1A6NKQ9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CGB1A6NKQ9 AC138393.1-203ENST00000327086 343 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 MIR448-201ENST00000362131 111 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 RNU1-132P-201ENST00000364300 164 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 Y_RNA.350-201ENST00000365409 98 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 RNU6-1329P-201ENST00000365664 107 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CGB1A6NKQ9 RNU6-209P-201ENST00000384118 107 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 Y_RNA.461-201ENST00000384263 103 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 RNU6-14P-201ENST00000384630 106 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 RPL21P1-201ENST00000399532 476 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 U3.42-201ENST00000408746 214 ntBASIC3.31□□□□□ -1.88
CGB1A6NKQ9 RNU4-61P-201ENST00000411243 107 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms