Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AC053481.4-201ENST00000583164 216 ntBASIC5.22□□□□□ -1.57
USP17L4A6NCW7 AC006557.5-201ENST00000603126 811 ntBASIC5.22□□□□□ -1.57
USP17L4A6NCW7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.22□□□□□ -1.57
USP17L4A6NCW7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L4A6NCW7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
USP17L4A6NCW7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
USP17L4A6NCW7 RLIMP1-201ENST00000339626 1680 ntBASIC5.21□□□□□ -1.57
USP17L4A6NCW7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
USP17L4A6NCW7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 RNU6-428P-201ENST00000362942 107 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 MIR190B-201ENST00000401119 79 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 RPL21P65-201ENST00000406094 466 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 RPS26P2-201ENST00000440331 348 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AL590664.1-201ENST00000448065 339 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AC108751.2-201ENST00000469993 231 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AC139453.3-201ENST00000493276 369 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 FTH1P9-201ENST00000513251 355 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 Y_RNA.673-201ENST00000516306 88 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 Y_RNA.713-201ENST00000517013 96 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 RNU1-45P-201ENST00000517191 141 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 TRAV28-201ENST00000557548 323 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 MIR4444-1-201ENST00000581696 74 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 MIR4444-2-201ENST00000584390 74 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AC131238.1-201ENST00000617135 328 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 AC091905.2-201ENST00000623143 306 ntBASIC5.21□□□□□ -1.58
USP17L4A6NCW7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L4A6NCW7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 Y_RNA.117-201ENST00000363294 101 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 SNORA62.3-201ENST00000365110 153 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 RNA5SP296-201ENST00000410523 111 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 RNU6-130P-201ENST00000411112 103 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 RPL21P38-201ENST00000418090 167 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 AC096920.1-201ENST00000423991 241 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 AC098614.2-201ENST00000426040 255 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 RPS29P27-201ENST00000463711 170 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 AC067942.3-201ENST00000512025 362 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 SNORA31.8-201ENST00000516327 108 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 SNORA70.16-201ENST00000516390 95 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 AC104581.2-201ENST00000572227 430 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 AC012433.1-201ENST00000588916 398 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 RPL7P50-201ENST00000600588 727 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 SCARNA4-202ENST00000625402 129 ntBASIC5.2□□□□□ -1.58
USP17L4A6NCW7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L4A6NCW7 MAPK10-286ENST00000641208 8747 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L4A6NCW7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
USP17L4A6NCW7 AC008568.2-201ENST00000623862 2313 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L4A6NCW7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
USP17L4A6NCW7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
USP17L4A6NCW7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
USP17L4A6NCW7 RNU6-708P-201ENST00000384217 107 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 MIR23A-201ENST00000385245 73 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 SNORA12.2-201ENST00000391040 156 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 CYCSP19-201ENST00000411715 316 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 RPL23AP25-201ENST00000430973 463 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 MTCO3P29-201ENST00000432119 779 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.19□□□□□ -1.58
USP17L4A6NCW7 RPL23AP81-201ENST00000455252 467 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 Y_RNA.706-201ENST00000516933 99 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 AC010186.2-204ENST00000537668 439 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 AL442163.3-201ENST00000554110 156 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 AL365434.2-201ENST00000607979 234 ntBASIC5.19□□□□□ -1.58
USP17L4A6NCW7 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms