Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
USP17L3A6NCW0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
USP17L3A6NCW0 RLIMP1-201ENST00000339626 1680 ntBASIC5.21□□□□□ -1.57
USP17L3A6NCW0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
USP17L3A6NCW0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 RNU6-428P-201ENST00000362942 107 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 MIR190B-201ENST00000401119 79 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 RPL21P65-201ENST00000406094 466 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 RPS26P2-201ENST00000440331 348 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AL590664.1-201ENST00000448065 339 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AC108751.2-201ENST00000469993 231 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AC139453.3-201ENST00000493276 369 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 FTH1P9-201ENST00000513251 355 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.673-201ENST00000516306 88 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.713-201ENST00000517013 96 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 RNU1-45P-201ENST00000517191 141 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 TRAV28-201ENST00000557548 323 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 MIR4444-1-201ENST00000581696 74 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 MIR4444-2-201ENST00000584390 74 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AC131238.1-201ENST00000617135 328 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 AC091905.2-201ENST00000623143 306 ntBASIC5.21□□□□□ -1.58
USP17L3A6NCW0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP17L3A6NCW0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.117-201ENST00000363294 101 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 SNORA62.3-201ENST00000365110 153 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 RNA5SP296-201ENST00000410523 111 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 RNU6-130P-201ENST00000411112 103 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 RPL21P38-201ENST00000418090 167 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 AC096920.1-201ENST00000423991 241 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 AC098614.2-201ENST00000426040 255 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 RPS29P27-201ENST00000463711 170 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 AC067942.3-201ENST00000512025 362 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 SNORA31.8-201ENST00000516327 108 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 SNORA70.16-201ENST00000516390 95 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 AC104581.2-201ENST00000572227 430 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 AC012433.1-201ENST00000588916 398 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 RPL7P50-201ENST00000600588 727 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 SCARNA4-202ENST00000625402 129 ntBASIC5.2□□□□□ -1.58
USP17L3A6NCW0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP17L3A6NCW0 MAPK10-286ENST00000641208 8747 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 AC008568.2-201ENST00000623862 2313 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 RNU6-708P-201ENST00000384217 107 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 MIR23A-201ENST00000385245 73 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 SNORA12.2-201ENST00000391040 156 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 CYCSP19-201ENST00000411715 316 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 RPL23AP25-201ENST00000430973 463 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 MTCO3P29-201ENST00000432119 779 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 RPL23AP81-201ENST00000455252 467 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.706-201ENST00000516933 99 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 AC010186.2-204ENST00000537668 439 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 AL442163.3-201ENST00000554110 156 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 AL365434.2-201ENST00000607979 234 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 AC099506.2-201ENST00000623074 221 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 AC010266.2-201ENST00000564741 3255 ntBASIC5.19□□□□□ -1.58
USP17L3A6NCW0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms