Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC021205.2-201ENST00000480069 347 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 SEPT14P4-201ENST00000513445 186 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AC105417.1-201ENST00000514691 285 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 NDUFB9P3-201ENST00000521269 501 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 FO082796.1-201ENST00000523795 183 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AP000867.2-201ENST00000532468 320 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 CKAP2P1-201ENST00000555477 2049 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 PWAR6-201ENST00000552334 4618 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 RNU6-1158P-201ENST00000391167 107 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC068050.1-201ENST00000394891 380 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 MTATP6P16-201ENST00000434543 526 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 CALM1P1-201ENST00000442082 433 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AL031183.1-201ENST00000457667 207 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC006512.1-201ENST00000468816 291 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 SNORA40.12-201ENST00000516329 111 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 RNU6-1256P-201ENST00000516539 103 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC009812.2-201ENST00000517657 457 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AL355836.1-201ENST00000555951 870 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC013553.2-201ENST00000604244 589 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 FER-210ENST00000628534 558 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 U6.114-201ENST00000636407 96 ntBASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
CDK11AQ9UQ88 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 CD24P4-201ENST00000382840 243 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 NDUFS5P1-201ENST00000405668 289 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 TRIAP1P1-201ENST00000427062 225 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 CST9LP2-201ENST00000437612 320 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 MTCO3P18-201ENST00000440206 761 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC016691.1-201ENST00000441321 413 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 GAPDHP27-201ENST00000447427 1020 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 NFU1P2-201ENST00000448700 469 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC116353.2-201ENST00000505332 712 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC011602.1-201ENST00000546484 331 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AC004696.1-201ENST00000614345 607 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 AL354950.2-201ENST00000617939 290 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 U6.42-201ENST00000618440 107 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 uc_338.11-201ENST00000619132 160 ntBASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDK11AQ9UQ88 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 RNU6-188P-201ENST00000364207 107 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 RNU6-534P-201ENST00000364877 106 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 RNU6-996P-201ENST00000365438 107 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 SNORA69-201ENST00000383895 132 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AL031121.1-201ENST00000406553 254 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 SDCBPP3-201ENST00000419629 891 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AL353572.1-201ENST00000442490 417 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 MTND4P18-201ENST00000447010 465 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 DNAJC8P1-201ENST00000554535 372 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AC008752.3-201ENST00000588113 712 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AL589994.2-201ENST00000621124 579 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 YWHAEP7-203ENST00000622054 312 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AC007998.5-201ENST00000622938 237 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 AC093648.1-201ENST00000623546 606 ntBASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.87□□□□□ -1.63
CDK11AQ9UQ88 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK11AQ9UQ88 RNU6-799P-201ENST00000363567 107 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms