Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 AC008568.2-201ENST00000623862 2313 ntBASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGC3Q9UN70 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AC063976.2-201ENST00000425667 3556 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 Y_RNA.215-201ENST00000364204 112 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 RNU6-211P-201ENST00000384047 107 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 RNU6-1181P-201ENST00000384191 106 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 Y_RNA.586-201ENST00000391146 98 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AL078599.1-201ENST00000402075 293 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AC009237.8-201ENST00000445492 379 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 RNA5SP54-201ENST00000516951 92 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 UBL5P4-201ENST00000562584 236 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 MIR3684-201ENST00000579779 74 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 MIR4691-201ENST00000583764 85 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AC006272.2-201ENST00000594725 163 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 AC084757.4-201ENST00000616350 526 ntBASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGC3Q9UN70 PCAT14-202ENST00000627127 3935 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 SNORA73.1-201ENST00000363107 205 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 Y_RNA.121-201ENST00000363309 113 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 SNORD32A-201ENST00000364805 84 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 RNA5SP428-201ENST00000365129 132 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 MIR765-201ENST00000390226 114 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 MTATP6P7-201ENST00000453315 681 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 RPL23AP3-201ENST00000453844 468 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 RNU5F-8P-201ENST00000515941 111 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 RNU6-1183P-201ENST00000517054 60 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 AC055872.1-201ENST00000570978 278 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 MIR5571-201ENST00000577998 113 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 MIR3691-201ENST00000578066 90 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 SAMMSON-226ENST00000642089 1582 ntBASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGC3Q9UN70 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 RNA5SP455-201ENST00000365190 119 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 SNORA70.10-201ENST00000384515 134 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 MIR1178-201ENST00000408396 91 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AL512844.2-201ENST00000433990 593 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 snoU13.24-201ENST00000458998 104 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 RN7SL517P-201ENST00000462240 305 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC016632.1-201ENST00000503994 196 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC097462.2-201ENST00000504623 481 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC091874.1-201ENST00000511402 339 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC093840.1-201ENST00000511599 336 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC233702.2-202ENST00000562547 291 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 snoU18.1-201ENST00000629629 71 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AC026523.2-201ENST00000625039 7739 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 SCARNA15-201ENST00000607520 4325 ntBASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGC3Q9UN70 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms