Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CXXC1Q9P0U4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CXXC1Q9P0U4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CXXC1Q9P0U4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.9□□□□□ -1.62
CXXC1Q9P0U4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CXXC1Q9P0U4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.9□□□□□ -1.62
CXXC1Q9P0U4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CXXC1Q9P0U4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
CXXC1Q9P0U4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 RNU6-600P-201ENST00000362524 99 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 RNU6-527P-201ENST00000363425 104 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 Y_RNA.358-201ENST00000365491 99 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 MIR493-201ENST00000385254 89 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 SDHCP2-201ENST00000398565 501 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AC092047.1-201ENST00000424997 240 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AL512844.2-201ENST00000433990 593 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AC023141.12-201ENST00000512399 199 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AP004607.1-201ENST00000524456 203 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AC107016.1-201ENST00000550463 337 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AL442163.3-201ENST00000554110 156 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 MIR6867-201ENST00000610636 67 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AL136164.3-201ENST00000624429 3978 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 AL079305.1-201ENST00000623159 3008 ntBASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.9□□□□□ -1.63
CXXC1Q9P0U4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 MIR331-201ENST00000362302 94 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 RNA5SP189-201ENST00000364920 115 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 SNORA9-201ENST00000384215 133 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 RNU6-708P-201ENST00000384217 107 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 Y_RNA.477-201ENST00000384352 108 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 RNU6-1093P-201ENST00000391194 107 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AP000275.1-201ENST00000411943 390 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AL356095.1-201ENST00000417217 199 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AL591043.1-201ENST00000432461 424 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AL513124.1-201ENST00000450410 614 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AC067942.3-201ENST00000512025 362 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AF186190.1-201ENST00000517470 480 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AC040958.1-201ENST00000561102 201 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 RN7SL600P-201ENST00000581811 299 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AC113403.1-201ENST00000604910 193 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 MIR8059-201ENST00000620427 81 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 AC112484.5-201ENST00000624189 228 ntBASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.89□□□□□ -1.63
CXXC1Q9P0U4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RNU6-50P-201ENST00000362356 103 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RNU1-108P-201ENST00000362556 161 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RNU6-105P-201ENST00000363909 104 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 Y_RNA.518-201ENST00000384552 113 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RNU4-70P-201ENST00000384579 139 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RNU6-658P-201ENST00000384606 106 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RPL21P75-201ENST00000396599 483 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RPL21P28-201ENST00000401418 483 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 RNA5SP31-201ENST00000411144 127 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 COX5BP7-201ENST00000414780 274 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 AL590556.1-201ENST00000423231 483 ntBASIC4.88□□□□□ -1.63
CXXC1Q9P0U4 AC096920.1-201ENST00000423991 241 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms