Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AL031595.2-201ENST00000624215 19071 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 MIR383-201ENST00000362257 73 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 RNA5SP361-201ENST00000362686 118 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 SNORD56.6-201ENST00000384569 71 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 RNU6-376P-201ENST00000384731 106 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 CTSL3P-202ENST00000412179 788 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AL358472.1-201ENST00000431295 329 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AC011998.1-201ENST00000433403 117 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AK3P2-201ENST00000507976 429 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 Y_RNA.797-201ENST00000515977 94 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 Y_RNA.712-201ENST00000517011 92 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 MIR5195-201ENST00000583555 115 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 AC023043.3-201ENST00000593113 385 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 MIR6867-201ENST00000610636 67 ntBASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL25A1Q9BXS0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 FTLP6-201ENST00000355274 422 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 SNORA70.10-201ENST00000384515 134 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RNU1-139P-201ENST00000391307 165 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 AL356095.1-201ENST00000417217 199 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 AL138785.1-201ENST00000425821 331 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RN7SL189P-201ENST00000468631 289 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RN7SL429P-201ENST00000479090 223 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RN7SL489P-201ENST00000486185 223 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RN7SL327P-201ENST00000488659 223 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 TRBV5-2-201ENST00000489095 273 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 AC107027.2-201ENST00000512197 115 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RN7SKP49-201ENST00000516675 260 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 AC244107.2-201ENST00000611773 76 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RN7SL853P-201ENST00000617250 223 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 AC109446.4-201ENST00000623235 2755 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 ZNF204P-201ENST00000416749 2397 ntBASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL25A1Q9BXS0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 AP001273.1-201ENST00000624493 3152 ntBASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 AC140134.1-201ENST00000511830 3544 ntBASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
COL25A1Q9BXS0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 RNA5SP124-201ENST00000362739 110 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 RNU6-199P-201ENST00000362954 107 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 RNU6-961P-201ENST00000363893 105 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 AL592148.1-201ENST00000413568 445 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 AC063976.4-201ENST00000421971 163 ntBASIC4.9□□□□□ -1.63
COL25A1Q9BXS0 MTCO1P44-201ENST00000441935 243 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms