Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RN7SL787P-201ENST00000613000 284 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC013791.1-201ENST00000616619 62 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RN7SL544P-201ENST00000617232 284 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RN7SL763P-201ENST00000620922 284 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 SNORA43.4-201ENST00000629559 138 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC068647.2-201ENST00000637380 353 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC107027.3-201ENST00000565095 3473 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RNU6-324P-201ENST00000363957 106 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RNU4-10P-201ENST00000364383 140 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 U8.7-201ENST00000364940 136 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RNU6-915P-201ENST00000364943 103 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RNU6-643P-201ENST00000384018 107 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 MRPL53P1-201ENST00000414323 319 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 AC009963.1-201ENST00000417265 157 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RPL23AP95-201ENST00000426806 265 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 PPIAP32-201ENST00000449940 472 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 SNRPGP7-201ENST00000469016 106 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RN7SL214P-201ENST00000487317 265 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RN7SL362P-201ENST00000494228 267 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RNA5SP464-201ENST00000516251 108 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 RNA5SP291-201ENST00000517222 105 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 AC021678.3-201ENST00000517893 476 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 MT1CP-201ENST00000567054 174 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 MIR4776-2-201ENST00000580204 80 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 MIR3914-2-201ENST00000637339 95 ntBASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP4Q9BWG4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
SSBP4Q9BWG4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.09□□□□□ -1.76
SSBP4Q9BWG4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSBP4Q9BWG4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
SSBP4Q9BWG4 AL359693.1-201ENST00000614959 2407 ntBASIC4.09□□□□□ -1.76
SSBP4Q9BWG4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AL159987.1-201ENST00000347911 293 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 Y_RNA.521-201ENST00000384560 114 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 MIR616-201ENST00000385293 97 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AL512633.1-201ENST00000399931 655 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AL009179.1-201ENST00000406085 265 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AL158823.1-201ENST00000418441 478 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 CYP4F29P-201ENST00000420685 446 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 FTH1P6-201ENST00000430768 320 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AC007679.3-201ENST00000434035 414 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 MTCO1P44-201ENST00000441935 243 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AP000281.1-201ENST00000444036 316 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 RN7SL254P-201ENST00000460609 284 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AL122020.1-201ENST00000472287 459 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AC113367.2-201ENST00000505749 160 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 NDUFA5P6-201ENST00000542110 379 ntBASIC4.08□□□□□ -1.76
SSBP4Q9BWG4 AC006349.1-201ENST00000555526 235 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms