Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 BX679664.1-201ENST00000434429 253 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT43Q96FT9 PIGFP3-201ENST00000441918 722 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 H2AFZP5-201ENST00000446960 382 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 AC034236.1-201ENST00000469891 373 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT43Q96FT9 IGLV2-34-201ENST00000490007 283 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 AC139453.3-201ENST00000493276 369 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.88□□□□□ -1.63
IFT43Q96FT9 SNORA25.14-201ENST00000516481 132 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 AP006289.1-201ENST00000538089 277 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.88□□□□□ -1.63
IFT43Q96FT9 AP002770.2-201ENST00000543613 532 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.88□□□□□ -1.63
IFT43Q96FT9 RPL23AP78-201ENST00000599928 470 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT43Q96FT9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
IFT43Q96FT9 AL356489.2-201ENST00000566968 3528 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT43Q96FT9 AC139713.2-215ENST00000641428 5037 ntBASIC4.88□□□□□ -1.63
IFT43Q96FT9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
IFT43Q96FT9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.88□□□□□ -1.63
IFT43Q96FT9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IFT43Q96FT9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT43Q96FT9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT43Q96FT9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IFT43Q96FT9 Y_RNA.123-201ENST00000363338 102 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 MIR141-201ENST00000384975 95 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 Y_RNA.581-201ENST00000391017 97 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IFT43Q96FT9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 EIF4HP2-201ENST00000424380 563 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 CKS1BP6-201ENST00000424932 240 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 RNA5SP392-201ENST00000516905 112 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC133555.2-201ENST00000550213 292 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 AP002826.1-201ENST00000608835 315 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC131238.1-201ENST00000617135 328 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC005086.4-201ENST00000623065 213 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 AC132825.6-201ENST00000638861 357 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 AL136164.3-201ENST00000624429 3978 ntBASIC4.87□□□□□ -1.63
IFT43Q96FT9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IFT43Q96FT9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
IFT43Q96FT9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
IFT43Q96FT9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
IFT43Q96FT9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
IFT43Q96FT9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 Y_RNA.16-201ENST00000362421 102 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 Y_RNA.143-201ENST00000363520 106 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 Y_RNA.199-201ENST00000364014 102 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 RNU6-335P-201ENST00000364563 113 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 RNU5E-7P-201ENST00000365290 117 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
IFT43Q96FT9 AL592291.1-201ENST00000403830 352 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 AC016397.1-201ENST00000412463 242 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 AC009220.1-201ENST00000451614 275 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 RPS5P7-201ENST00000456664 608 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 AC092798.1-201ENST00000458542 409 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 RNU7-120P-201ENST00000459334 63 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 RN7SL481P-201ENST00000477764 299 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 SERF1AP1-201ENST00000514575 187 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 RNU6-255P-201ENST00000516957 105 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 CASP1P1-201ENST00000526345 212 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 AC010186.2-204ENST00000537668 439 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 CBX3P4-201ENST00000538909 354 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 AL713866.2-201ENST00000603579 219 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 FAM27B-201ENST00000610601 213 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 AC090132.2-201ENST00000615881 347 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 AP000346.3-201ENST00000622821 210 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 U4.7-201ENST00000638126 106 ntBASIC4.86□□□□□ -1.63
IFT43Q96FT9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
IFT43Q96FT9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
IFT43Q96FT9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms