Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 Z99571.1-201ENST00000636677 394 ntBASIC2.64□□□□□ -1.99
CCDC47Q96A33 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC47Q96A33 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
CCDC47Q96A33 AC069528.2-201ENST00000624849 1991 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AL596028.1-201ENST00000326971 197 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 MIRLET7G-201ENST00000362280 84 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 RNU6-1200P-201ENST00000384162 107 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 U6atac.2-201ENST00000408644 118 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 RNU2-62P-201ENST00000410868 191 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 OR51A5P-201ENST00000415429 942 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 BRK1P2-201ENST00000442875 223 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 SNORD97-201ENST00000459187 142 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC47Q96A33 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC004924.1-201ENST00000480160 781 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 MTND1P3-201ENST00000484956 952 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 RPL7P20-201ENST00000520308 745 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 CYCSP26-201ENST00000534107 320 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 ARL2BPP2-201ENST00000550907 489 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 AL138976.2-201ENST00000563989 694 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 MIR4782-201ENST00000577987 79 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 MIR3908-201ENST00000579798 126 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC006023.1-201ENST00000603944 259 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC104763.2-201ENST00000604179 382 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AP000860.1-201ENST00000605250 559 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC009090.3-201ENST00000616553 565 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 AP003400.5-201ENST00000624827 617 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 OR4G3P-201ENST00000633500 913 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AL512643.1-201ENST00000635735 524 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC47Q96A33 AC007336.1-201ENST00000576365 3828 ntBASIC2.63□□□□□ -1.99
CCDC47Q96A33 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC47Q96A33 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC47Q96A33 Z98749.2-208ENST00000381646 500 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 RPS20P2-201ENST00000402520 389 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 FCF1P10-201ENST00000407590 479 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 U3.37-201ENST00000408528 213 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 RNU2-36P-201ENST00000410361 191 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 MORF4L1P6-201ENST00000418771 268 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 RPS3AP44-201ENST00000425466 790 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC47Q96A33 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC116347.2-201ENST00000514912 523 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 SCARNA1-201ENST00000517138 166 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 AP003122.3-201ENST00000526316 255 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC084851.1-201ENST00000529105 249 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 ISCA1P3-201ENST00000577104 373 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC007938.3-201ENST00000604965 623 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC47Q96A33 AC009159.1-201ENST00000618386 642 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 AL031667.3-201ENST00000620124 655 ntBASIC2.62□□□□□ -1.99
CCDC47Q96A33 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 RSL24D1P4-201ENST00000400938 484 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 USP9YP27-201ENST00000418455 438 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC234781.5-201ENST00000508429 271 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 SNORA25.11-201ENST00000515935 105 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 RNU7-193P-201ENST00000516723 65 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 RNU6-1003P-201ENST00000517099 105 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC009902.1-201ENST00000519351 183 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AP001004.1-201ENST00000582468 324 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 AP001981.2-201ENST00000603241 418 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC47Q96A33 uc_338.12-201ENST00000616344 181 ntBASIC2.61□□□□□ -1.99
CCDC47Q96A33 MIR6134-201ENST00000617606 109 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms