Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNPOQ8N3V7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.11□□□□□ -1.75
SYNPOQ8N3V7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNPOQ8N3V7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SYNPOQ8N3V7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNPOQ8N3V7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC018529.3-201ENST00000624212 2254 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 RNA5SP124-201ENST00000362739 110 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 SNORA73.2-201ENST00000364946 201 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 Y_RNA.509-201ENST00000384506 99 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 Y_RNA.535-201ENST00000384612 99 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 MIR888-201ENST00000401186 77 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 MIR548K-201ENST00000408406 116 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 NDUFB1P2-201ENST00000449477 176 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 BTF3P15-201ENST00000455606 336 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC128713.1-201ENST00000471495 306 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC096745.1-201ENST00000509945 370 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AP005597.4-201ENST00000526762 229 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AP000867.2-201ENST00000532468 320 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AMZ2P1-203ENST00000565833 850 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AC008121.1-201ENST00000603244 268 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 MIR6128-201ENST00000615528 109 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 AL158196.1-201ENST00000616786 434 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 MIR7702-201ENST00000621931 59 ntBASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNPOQ8N3V7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 RNU4-79P-201ENST00000362764 141 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 Y_RNA.387-201ENST00000383918 102 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 MIR30B-201ENST00000384850 88 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 RNU6-1106P-201ENST00000390845 107 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 RPL26P27-201ENST00000414397 437 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 CEACAMP4-201ENST00000457676 421 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 RPL7P49-201ENST00000471402 708 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AC026801.1-201ENST00000497178 464 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 UBE2CP3-201ENST00000502715 450 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 MTND5P5-201ENST00000503764 376 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AC092436.3-201ENST00000511788 257 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 RNU1-95P-201ENST00000516357 160 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 RNU1-128P-201ENST00000516704 160 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 ELOCP5-201ENST00000604924 333 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AC012531.5-201ENST00000611375 151 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 AL391261.4-201ENST00000616012 481 ntBASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYNPOQ8N3V7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SYNPOQ8N3V7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SYNPOQ8N3V7 AC006026.1-201ENST00000444025 1803 ntBASIC4.09□□□□□ -1.76
SYNPOQ8N3V7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.09□□□□□ -1.76
SYNPOQ8N3V7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 RNA5SP295-201ENST00000362655 121 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 RNU6-525P-201ENST00000363685 104 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 RNA5SP97-201ENST00000365006 84 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 RNU6-898P-201ENST00000365627 104 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 Y_RNA.474-201ENST00000384341 102 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 RNA5SP38-201ENST00000410750 119 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 AC004552.1-201ENST00000419089 348 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 RPL7P37-201ENST00000425095 738 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 SKA2P1-201ENST00000425592 390 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 AL358472.1-201ENST00000431295 329 ntBASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.08□□□□□ -1.76
SYNPOQ8N3V7 FGF7P3-201ENST00000454645 303 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms