Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF72P-201ENST00000425869 1908 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-37P-201ENST00000362692 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-11P-201ENST00000364234 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-99P-201ENST00000364721 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-7-201ENST00000364784 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-8-201ENST00000365467 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-25P-201ENST00000383873 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-1-201ENST00000383898 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-48P-201ENST00000384161 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-36P-201ENST00000384172 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-4P-201ENST00000384205 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-5P-201ENST00000384238 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-3P-201ENST00000384314 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-16P-201ENST00000384385 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-15P-201ENST00000384534 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-2-201ENST00000384627 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-29P-201ENST00000384637 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-9-201ENST00000384776 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-33P-201ENST00000384793 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 MIR1302-3-201ENST00000408128 138 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC108059.2-201ENST00000434626 151 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC011816.1-201ENST00000441346 546 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AL731563.1-201ENST00000442202 214 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AL162151.2-201ENST00000448875 158 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC110794.1-201ENST00000505816 425 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC116655.1-201ENST00000508324 901 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 IFITM8P-201ENST00000522529 394 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 TRAV32-201ENST00000553993 340 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AL161670.1-201ENST00000554348 137 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-6P-201ENST00000606623 107 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AL591516.1-201ENST00000611326 274 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC138627.2-201ENST00000624202 601 ntBASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TRIM48Q8IWZ4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 RNY3P11-201ENST00000364153 102 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-384P-201ENST00000364900 104 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-395P-201ENST00000365662 106 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 Y_RNA.574-201ENST00000384766 95 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AL592148.1-201ENST00000413568 445 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AL356095.1-201ENST00000417217 199 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 PGBD4P6-201ENST00000421501 610 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC093151.1-201ENST00000427711 313 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AL117339.2-201ENST00000430475 180 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 USP9YP7-201ENST00000436723 430 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 USP9YP32-201ENST00000452432 430 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC011005.2-201ENST00000487324 359 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC022447.4-201ENST00000504053 364 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC006499.6-201ENST00000511169 607 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC084851.1-201ENST00000529105 249 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 CBX3P8-201ENST00000532412 525 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 GNAI2P1-201ENST00000541815 315 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 HSBP1P1-201ENST00000555205 166 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 CYP4A43P-201ENST00000568156 121 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 MIR4273-201ENST00000582824 84 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 MIR6867-201ENST00000610636 67 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC131238.1-201ENST00000617135 328 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 MIR7702-201ENST00000621931 59 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 AC066616.2-201ENST00000559334 1481 ntBASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TRIM48Q8IWZ4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.03□□□□□ -1.77
TRIM48Q8IWZ4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 SNORA60-201ENST00000362396 134 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms