Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC073534.2-201ENST00000620377 381 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 MIR8057-201ENST00000620957 69 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 SEPT14P19-203ENST00000633205 211 ntBASIC2.94□□□□□ -1.94
LDB1Q86U70 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LDB1Q86U70 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.94□□□□□ -1.94
LDB1Q86U70 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
LDB1Q86U70 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
LDB1Q86U70 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LDB1Q86U70 MTND4P35-201ENST00000604257 1375 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LDB1Q86U70 Y_RNA.159-201ENST00000363674 87 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 SNORA62.1-201ENST00000364287 154 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 SNORD115-7-201ENST00000365306 82 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 RNU4-48P-201ENST00000365559 182 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LDB1Q86U70 RNU6-606P-201ENST00000384721 111 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 Y_RNA.576-201ENST00000384781 102 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.93□□□□□ -1.94
LDB1Q86U70 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB1Q86U70 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LDB1Q86U70 SKA2P1-201ENST00000425592 390 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 CALM2P2-201ENST00000428512 440 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 AL589823.1-201ENST00000429577 183 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 HMGB1P9-201ENST00000429856 646 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 RPS15AP9-201ENST00000439856 381 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB1Q86U70 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB1Q86U70 RPS29P2-201ENST00000479278 136 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 AP004217.1-201ENST00000480579 346 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 RPL36AP51-201ENST00000487216 318 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 RPS29P20-201ENST00000489592 171 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 AC139453.3-201ENST00000493276 369 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 AC107401.1-201ENST00000503426 685 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 RBBP4P6-201ENST00000508098 202 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 Y_RNA.655-201ENST00000515919 96 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 RNU6-703P-201ENST00000516946 107 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.93□□□□□ -1.94
LDB1Q86U70 RANP3-201ENST00000530970 276 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 H3F3AP1-201ENST00000559984 334 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 MIR1273C-201ENST00000578669 77 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
LDB1Q86U70 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
LDB1Q86U70 AC078795.2-201ENST00000602835 1252 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.93□□□□□ -1.94
LDB1Q86U70 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.93□□□□□ -1.94
LDB1Q86U70 OR5AK4P-201ENST00000635912 903 ntBASIC2.93□□□□□ -1.94
LDB1Q86U70 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LDB1Q86U70 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.92□□□□□ -1.94
LDB1Q86U70 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LDB1Q86U70 Y_RNA.1-201ENST00000352915 104 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 MIR422A-201ENST00000362286 90 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 RNU1-105P-201ENST00000363470 161 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 CISD1P1-201ENST00000393907 327 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 RNU4-55P-201ENST00000410731 137 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB1Q86U70 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB1Q86U70 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB1Q86U70 OR51A5P-201ENST00000415429 942 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 MTCYBP5-201ENST00000423752 1135 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB1Q86U70 BRK1P2-201ENST00000442875 223 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB1Q86U70 MTATP6P7-201ENST00000453315 681 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.92□□□□□ -1.94
LDB1Q86U70 TPTE2P5-203ENST00000458118 728 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB1Q86U70 AC026801.1-201ENST00000497178 464 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.92□□□□□ -1.94
LDB1Q86U70 RPL37P25-201ENST00000507308 276 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AC104806.1-201ENST00000508720 308 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB1Q86U70 RNA5SP385-201ENST00000515947 110 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 PSMA2P1-201ENST00000526365 646 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 OR5BN1P-201ENST00000532955 829 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB1Q86U70 AL157871.3-201ENST00000557231 293 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.92□□□□□ -1.94
LDB1Q86U70 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.92□□□□□ -1.94
LDB1Q86U70 MIR4775-201ENST00000581168 75 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AL391646.1-201ENST00000603860 190 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 uc_338.11-201ENST00000619132 160 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AC011155.2-201ENST00000623202 216 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 AC005609.4-201ENST00000625071 447 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.92□□□□□ -1.94
LDB1Q86U70 AC008669.1-201ENST00000565823 2178 ntBASIC2.92□□□□□ -1.94
LDB1Q86U70 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.92□□□□□ -1.94
LDB1Q86U70 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
LDB1Q86U70 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.91□□□□□ -1.94
LDB1Q86U70 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LDB1Q86U70 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.91□□□□□ -1.94
LDB1Q86U70 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.91□□□□□ -1.94
LDB1Q86U70 NACAP2-201ENST00000318548 624 ntBASIC2.91□□□□□ -1.94
LDB1Q86U70 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.91□□□□□ -1.94
LDB1Q86U70 MIR483-201ENST00000385070 76 ntBASIC2.91□□□□□ -1.94
LDB1Q86U70 RNU2-9P-201ENST00000410194 145 ntBASIC2.91□□□□□ -1.94
LDB1Q86U70 RNA5SP111-201ENST00000411386 101 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms