Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 SNORA70.7-201ENST00000384159 133 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 OFD1P18Y-201ENST00000420889 959 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 YWHAZP8-201ENST00000436935 731 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 SNORA48.10-201ENST00000516965 160 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AC103810.8-201ENST00000607347 118 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AP003400.5-201ENST00000624827 617 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AC097372.4-201ENST00000625025 466 ntBASIC0.76□□□□□ -2.29
UBR3Q6ZT12 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.76□□□□□ -2.29
UBR3Q6ZT12 Y_RNA.68-201ENST00000362881 102 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 RNU5D-1-201ENST00000363299 116 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 SSR1P1-201ENST00000407630 814 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC018437.1-201ENST00000492214 406 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC021146.2-201ENST00000504736 556 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AK3P2-201ENST00000507976 429 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 BNIP3P25-201ENST00000596023 559 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 HSPE1P19-201ENST00000603327 295 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AL355877.2-201ENST00000603670 358 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC025588.2-201ENST00000604851 466 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AL136313.1-201ENST00000624804 202 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC004808.1-201ENST00000627671 721 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 RNU6-244P-201ENST00000391028 104 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 CBX3P3-201ENST00000508108 532 ntBASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UBR3Q6ZT12 RNU6-1251P-201ENST00000364502 107 ntBASIC0.74□□□□□ -2.29
UBR3Q6ZT12 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.74□□□□□ -2.29
UBR3Q6ZT12 MTCO3P12-201ENST00000416718 547 ntBASIC0.74□□□□□ -2.29
UBR3Q6ZT12 AC008494.2-201ENST00000514544 370 ntBASIC0.74□□□□□ -2.29
UBR3Q6ZT12 RNU6-319P-201ENST00000516025 108 ntBASIC0.74□□□□□ -2.29
UBR3Q6ZT12 SNORA44.1-201ENST00000517031 108 ntBASIC0.74□□□□□ -2.29
UBR3Q6ZT12 AC243960.4-201ENST00000600532 288 ntBASIC0.74□□□□□ -2.29
UBR3Q6ZT12 DUXAP10-204ENST00000612052 616 ntBASIC0.74□□□□□ -2.29
UBR3Q6ZT12 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.74□□□□□ -2.29
UBR3Q6ZT12 MIR26B-201ENST00000362251 77 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 VTRNA1-3-201ENST00000365645 89 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AL589655.1-201ENST00000405398 482 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 RPS20P10-201ENST00000451209 253 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 RPS27P23-201ENST00000487608 251 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 SCARNA11.3-201ENST00000517276 130 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 MIR3609-201ENST00000582661 80 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AC004852.3-201ENST00000614131 326 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AC010329.5-201ENST00000623497 2174 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 ZNF29P-201ENST00000225587 168 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 RNA5SP258-201ENST00000362750 119 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 RNU6-712P-201ENST00000410558 100 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AL714022.1-201ENST00000439897 151 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AC116337.2-201ENST00000477662 156 ntBASIC0.73□□□□□ -2.29
UBR3Q6ZT12 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.73□□□□□ -2.29
UBR3Q6ZT12 RBBP8P1-201ENST00000449447 1844 ntBASIC0.72□□□□□ -2.29
UBR3Q6ZT12 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
UBR3Q6ZT12 Y_RNA.493-201ENST00000384422 102 ntBASIC0.72□□□□□ -2.29
UBR3Q6ZT12 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
UBR3Q6ZT12 ZNF965P-201ENST00000432501 817 ntBASIC0.72□□□□□ -2.29
UBR3Q6ZT12 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.72□□□□□ -2.29
UBR3Q6ZT12 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.72□□□□□ -2.29
UBR3Q6ZT12 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
UBR3Q6ZT12 RNU6-1308P-201ENST00000516817 103 ntBASIC0.72□□□□□ -2.29
UBR3Q6ZT12 AP003355.1-201ENST00000518956 587 ntBASIC0.72□□□□□ -2.29
UBR3Q6ZT12 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.72□□□□□ -2.29
UBR3Q6ZT12 AL355802.3-201ENST00000607571 545 ntBASIC0.72□□□□□ -2.29
UBR3Q6ZT12 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
UBR3Q6ZT12 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms